Some Useful Links...

Matlab links

EE & Circuits links

Math Links

Scientific Computing and Numerical Analysis/Methods

Statistics Links

Quantum Physics and Chemistry Links


Inverse Theory, Optimization, etc Links

Oceanography, Meteorology, etc Links

Programming Links



Matlab Links:

TOCSY - Toolboxes for Complex Systems
http://tocsy.agnld.uni-potsdam.de/

Model Reduction of Multi-dimensional and Uncertain systems
http://scowl.ge.uiuc.edu/~ssivakum/research.html

Kernel Density Estimation Toolbox for MATLAB (R13)
http://ssg.mit.edu/~ihler/code/

YALMIP is a MATLAB toolbox for rapid prototyping of optimization problems
http://control.ee.ethz.ch/~joloef/yalmip.php

The Engineering Vibration Toolbox
http://www.cs.wright.edu/people/faculty/jslater/vtoolbox/vtoolbox.html

CUEDSID: Cambridge University System Identification Toolbox
http://www-control.eng.cam.ac.uk/jmm/cuedsid/

ENTOOL is a software package for ensemble regression modelling.
http://chopin.zet.agh.edu.pl/~wichtel/index.html

Kalman filter toolbox for matlab:
http://www.iau.dtu.dk/research/control/kalmtool.html

E&M book and matlab code
http://www.ece.rutgers.edu/~orfanidi/ewa/

Regularization Tools: A Matlab package for analysis and solution of discrete ill-posed problems
http://www.imm.dtu.dk/~pch/Regutools/regutools.html

Matlab genetic programming toolbox
http://gplab.sourceforge.net/

Electrical Engineering & Circuits Links:

http://www.faqs.org/docs/electric/

Lecture notes on State Space Systems
http://cnx.rice.edu/content/col10143/latest/

Lecture notes on FIR Filter Design
http://cnx.rice.edu/content/col10226/latest/

Lecture notes on Signals and Systems
http://cnx.rice.edu/content/col10064/latest/


Math Links:

Green's Function Library
http://www.engr.unl.edu/~glibrary/home/index.html

Matrix calculus / linear algebra "reference manual"
http://www.ee.ic.ac.uk/hp/staff/dmb/matrix/intro.html

Some notes on linear operators in QM
http://vergil.chemistry.gatech.edu/notes/quantrev/node10.html

Some notes on finite vector space representations
http://www.met.rdg.ac.uk/~ross/DARC/LinearVectorSpaces.html

Lecture notes on linear algebra, Hilbert spaces, PDEs, ODEs
http://www.math.gatech.edu/~herod/

Lecture notes on Matrix Analysis
http://cnx.rice.edu/content/col10048/latest/

Lecture notes on Linear Dynamical Systems
http://www.stanford.edu/class/ee363/

Lecture notes on Introduction to Linear Dynamical Systems
http://www.stanford.edu/class/ee263/

Lecture notes on Dynamic Systems and Controls
http://ocw.mit.edu/OcwWeb/Electrical-Engineering-and-Computer-Science/6-241Fall2003/CourseHome/index.htm

Lecture notes on data analysis, numerical modeling, etc in geochemistry
http://w3eos.whoi.edu/12.747/lectures.html

Some links on eigenvalue dependent boundary conditions:
http://www.math.ucalgary.ca/general/directory.php?personid=17&pubid=816&__Goto=goto
http://link.aip.org/link/?JASMAN/61/913/1
http://antiflux.org/~warcode/wjcquad.pdf

Summary of eigensolvers:
http://www.cs.ucdavis.edu/~bai/ET/sa_chapter_8.html

Gerard Sleijpen's web page (iterative methods, matlab code, etc)
http://www.math.uu.nl/people/sleijpen/index.html

Linear algebra and linear operators in engineering with applications in Mathematica
H. Ted Davis, Kendall T. Thomson.
ENGG QA184 .D38 2000g

Finite dimensional linear systems (Series in decision and control)
Roger W. Brockett
http://www.amazon.com/exec/obidos/ASIN/0471105856/ref%3Dnosim/bookhq02-20/103-7942725-3295043
Engg QA402 .B68

Linear algebra done right
Sheldon  Axler
http://www.axler.net/LADR.html
MATH QA184 .A96 1997

Applied linear algebra : the decoupling principle
Lorenzo Sadun.
http://rene.ma.utexas.edu/users/sadun/
ENGG: QA184 .S23 2001

Elementary functional analysis
Georgi E. Shilov
http://www.amazon.com/exec/obidos/tg/detail/-/0486689239/ref=pd_qpt_gw_5/104-0829244-8791130

Interactive Real Analysis (online interactive book)
http://www.shu.edu/projects/reals/reals.html

Lecture notes and Advanced Calculus and Analysis
http://www.maths.abdn.ac.uk/~igc/tch/ma2001/notes/notes.html

Lecture notes on Analysis
http://www.math.unl.edu/~webnotes/contents/contents.htm

Lecture notes on Functional Analysis
http://www.ma.utexas.edu/users/arbogast/m383d.html

Ordinary Differential Equations and Dynamical Systems (online book)
http://radon.mat.univie.ac.at/~gerald/ftp/book-ode/

Solving ODEs with MATLAB
by L. F. Shampine, I. Gladwell, S. Thompson
http://www.amazon.com/exec/obidos/tg/detail/-/0521530946/ref=pd_ys_166/002-2810750-1387210?v=glance&s=books

Scientific Computing and Numerical Analysis/Methods

Some links on advection schemes:
Numerical methods in global transport-chemistry models
E.J. Spee.  PhD thesis, Univ. Amsterdam, 1998.
http://homepages.cwi.nl/~gollum/MAS1.1/Papers.html

Willem Hundsdorfer's home page (numerical schemes for advection-diffusion-reaction flows)
http://homepages.cwi.nl/~willem/

Lecture notes on Sparse Matrix Algorithms
http://www.cs.ucsb.edu/~gilbert/cs290hFall2004/

Lecture notes on Advanced Numerical Linear algebra (Danny Sorensen)
http://www.caam.rice.edu/~caam551/

Lecture notes on numerical methods in heat transfer and fluid dynamics
http://www.personal.psu.edu/faculty/j/h/jhm/ME540/

GUPTRI Software for singular pencils
http://www.cs.umu.se/~guptri/

References on sparse matrix computations
http://www.cse.uiuc.edu/cse512/supplement/ref.html

BOOST C++ Library for Sparse Matrix Ordering
http://www.boost.org/libs/graph/doc/sparse_matrix_ordering.html

Software for Sparse Matrix Partitioning
http://www.math.uu.nl/people/bisseling/Mondriaan/mondriaan.html

Some links on sparse matrix-vector multiplication:
http://citeseer.ist.psu.edu/im99optimizing.html
http://www.cs.berkeley.edu/~yelick/sparsity/
http://www.cs.utk.edu/~dongarra/etemplates/node381.html
http://www.cs.ucsb.edu/~gilbert/cs290hFall2004/

Sparse matrix formats
http://www.cs.utk.edu/~dongarra/etemplates/node372.html#sec:data-structures

Statistics

British Medical Journal: Statistical Notes
http://www.tufts.edu/~gdallal/bmj.htm

Handbook of Statistical Practice
http://www.tufts.edu/~gdallal/LHSP.HTM
                                
Harmonic inversion software
http://ab-initio.mit.edu/harminv/

Quantum physics and chemistry

Extensive set of notes on quantum chemistry
http://vergil.chemistry.gatech.edu/notes/

Problems & Solutions to Accompany McQuarrie - Simon Physical Chemistry: A Molecular Approach
Heather Cox

http://www.amazon.com/exec/obidos/tg/detail/-/0935702431/qid=1085974712/sr=1-1/ref=sr_1_1/103-7942725-3295043?v=glance&s=books

Quantum chemistry
Ira Levine
http://www.amazon.com/exec/obidos/tg/detail/-/0136855121/ref=pd_sbs_b_3/103-7942725-3295043?v=glance&s=books

Modern Quantum Chemistry: Introduction to Advanced Electronic Structure Theory
by Attila Szabo, Neil S. Ostlund
http://www.amazon.com/exec/obidos/tg/detail/-/0070627398/ref=pd_sbs_b_3/103-7942725-3295043?v=glance&s=books

Three phases of matter
Walton, A. J.
http://www.bookfinder4u.com/IsbnSearch.aspx?isbn=0198519575&mode=direct

Lecture notes on Advanced Quantum Mechanics
http://www.amherst.edu/~waloinaz/Physics53_f04.html

Visual Quantum Mechanics (book and software)
http://www.kfunigraz.ac.at/imawww/vqm/bookone.html

Author:      Budker, Dmitry.
Title:     Atomic physics : an exploration through problems and solutions / Dmitry Budker, Derek F. Kimball, and David P. DeMille.
Publisher/ Date:     Oxford ; New York : Oxford University Press, 2004.
Location:     PHYSICS
Call Number:     QC776 .B82 2004g

Inverse Theory, Optimization, etc

Lecture notes on Geophysical Inverse Theory
http://web.ics.purdue.edu/~nowack/eas657.html

Notes on adjoint modeling
http://www.sat.uni-bremen.de/workshops/radiative_transfer4/contributions/adjoint_models/

Survival Guide for Optimization
http://www.cs.umd.edu/~oleary/m607/survivalo.html

Lecture notes on Geophysical Inverse Theory
http://acoustics.mines.edu/~jscales/gp605/

A First Course in Optimization Theory
by Rangarajan K. Sundaram
http://www.amazon.com/exec/obidos/tg/detail/-/0521497701/ref=pd_sim_books_1/002-0004705-6336859?v=glance&s=books
ENGINEERING QA402.5 .S837 1996

Genetic algorithms evolutionary computing etc
http://www.icsi.berkeley.edu/~storn/code.html

Evolutionary computing package (BEAGLE)
http://beagle.gel.ulaval.ca/

Oceanography & Meteorology

Lecture notes on Coupled Atmosphere-Ocean Interactions
http://www.atmos.washington.edu/~david/ATM560/560.html

Some tutorials/code in meteorology etc
http://mensch.org/

ASAD atmospheric chemistry software
http://www.atm.ch.cam.ac.uk/acmsu/asad/index.html

Lecture notes on atmospheric dynamics (Greg Hakim)
http://www.atmos.washington.edu/~hakim/442/


Programming Links

Some notes on Latex and PDF
http://semantics-online.org/geek/2004/07/latexmk_and_texshop_automagic_pdfpreview_of_latex_documents

Fortran 90/95 tutorials
http://www.nsc.liu.se/~boein/fortran.html
http://www.ifremer.fr/ditigo/molagnon/fortran90/engfaq.html

Some notes/code on PETSc, parallel computing etc
http://venda.uku.fi/~vanne/parallel/

MPI links (lecture notes, tutorials, etc):
http://rocs.acomp.usf.edu/tut/mpi.php
http://rocs.acomp.usf.edu/classes/?parent_id=21
http://www.netlib.org/utk/papers/mpi-book/mpi-book.html
http://www.phyast.pitt.edu/beowulf/Tutorial.html
http://www.epcc.ed.ac.uk/epic/mpi/notes/mpi-course-epic.book_1.html
http://apple.sysbio.info/~mjhsieh/archives/000325.html (some notes on installing/using MPI on G5's)
http://www.stat.ucla.edu/computing/clusters/deployment.php (some notes on Mac OS X Beowulf clusters)

Notes on C programming
http://www.eskimo.com/~scs/cclass/cclass.html

CVS:
http://www.macworld.com/2003/09/secrets/bbeditversioncontrol/
http://www.novajo.ca/cvs.html
http://developer.apple.com/internet/opensource/cvsoverview.html

Shell scripting:
http://steve-parker.org/sh/sh.shtml
http://www.shelldorado.com/links/index.html#tutorials
http://www.shelldorado.com/goodcoding/cmdargs.html
http://www.tldp.org/LDP/abs/html/
http://freebooks.by.ru/view/RedHatLinux6Unleashed/rhl6u226.htm
http://freebooks.by.ru/view/ShellProgIn24h/index.htm