OLD
author Andreas Thurnherr <ant@ldeo.columbia.edu>
Mon, 13 Apr 2020 11:06:22 -0400
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permissions -rw-r--r--
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A.M. Thurnherr <athurnherr@yahoo.com>
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#======================================================================
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#                    O L D 
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#                    doc: Tue Nov 26 21:59:40 2013
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#                    dlm: Mon Jul  1 15:15:19 2019
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#                    (c) 2017 A.M. Thurnherr
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#                    uE-Info: 698 42 NIL 0 0 70 2 2 4 NIL ofnI
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#======================================================================
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# HISTORY:
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#	Nov 26, 2013: - created
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#	Dec  1, 2013: - removed HDG_ROT
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#				  - added support for IMP data gaps
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#	Mar  4, 2014: - added support for DATA_SOURCE_ID
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#	May 22, 2014: - use +/-2deg to assess quality of heading offset
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#	May 23, 2014: - added $dhist_binsize, $dhist_min_pirom
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#	Jul 27, 2016: - updated variable names for consistency
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#	Jul 28, 2016: - major re-write if merging routines
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#	Jul 29, 2016: - cosmetics
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#				  - increased heading-offset resolution from 2 to 1 degrees
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#				  - BUG: inconsistent heading definition used (from old IMP with
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#						 confused coordinates)
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#				  - modified initial timelag guess (there was a bug and it is 
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#				    likely more robust based on end time rather than start time)
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#	Aug  5, 2016: - BUG: weird statement accessing LADCP_begin-1
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#				  - BUG: DSID of first ensemble was not left original
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#	Aug 22, 2016: - major changes to timelagging
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#	Aug 23, 2016: - changed semantics for removing ensembles with bad attitudes:
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#					instead of setting attitude to undef (or large pitch/roll),
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#					clearEns() is used
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#	Aug 24, 2016: - overhauled time-lagging
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#	Aug 25, 2016: - significant code cleanup
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#	Aug 26, 2016: - added _hdg_err.ps output plot
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#	Oct 13, 2016: - made hdg nan for invalid records (BUG with current versions of IMP+LADCP, IMPatchPD0)
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#	Nov 22, 2016: - added heading-offset plot
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#				  - added sensor info to plots
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#	Nov 29, 2016: - added stats to compass error plot
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#	Dec 29, 2016: - improved histogram plot
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#	Nov 16, 2017: - adapted rot_vecs() to KVM coordinates
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#				  - made sensor information optional in
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#	Nov 20, 2017: - major code cleanup
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#	Nov 22, 2017: - replaced "IMP" output in routines used by KVH by "IMU"
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#	Dec  8, 2017: - replaced remaing "IMP" output (e.g. in plot) by "IMU"
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#	May 22, 2018: - added data trimming to rot_vec
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#	May 23, 2018: - added horizontal field strength to mag calib plot
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#				  - added support for S/N 8 board inside UL WH300 (neg_piro == 2)
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#	May 24, 2018: - continued working (coord_trans == 2)
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#	May 25, 2018: - continued working
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#	May 30, 2018: - BUG: trimming did not re-calculate elapsed time
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#	Jun  5, 2018: - BUG: on -c main magnetometer and accelerometer vectors were
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#						 modified twice
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#	Jun  7, 2018: - relaxed definition of -e
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#	Jun  9, 2018: - BUG: some "edge" data (beyond the valid profile) were bogus (does not matter in practice)
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#----------------------------------------------------------------------
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# gRef() library
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#----------------------------------------------------------------------
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sub pl_mag_calib_begin($$$)															# initialize mag_calib plot
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{
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	my($pfn,$plotsize,$axlim) = @_;
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	my($xmin,$xmax) = (-$axlim,$axlim);
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	my($ymin,$ymax) = (-$axlim,$axlim);
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	GMT_begin($pfn,"-JX${plotsize}","-R$xmin/$xmax/$ymin/$ymax",'-X6 -Y4 -P');
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	GMT_psxy('-Sc0.05');
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}
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sub pl_mag_calib_plot($$$)															# plot data point
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{
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	my($valid,$magX,$magY) = @_;
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	if ($valid)	{ print(GMT "> -Wred -Gred\n$magX $magY\n"); }
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	else 		{ print(GMT "> -Wgreen -Ggreen\n$magX $magY\n"); }
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}
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sub pl_mag_calib_end($$)															# finish mag_calib plot
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{
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	my($axlim,$HF_mag,$sensor_info) = @_;
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	GMT_psxy('-Sc0.1 -Gblue');														# calibration circle
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	for (my($a)=0; $a<2*$pi; $a+=0.075) {
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		printf(GMT "%f %f\n",$HF_mag*sin($a),$HF_mag*cos($a));
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	}
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	if ($axlim <= 0.1) {															# axes labels
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		GMT_psbasemap('-Bg1a.04f.001:"X Magnetic Field [Gauss]":/g1a0.02f0.001:"Y Magnetic Field [Gauss]":WeSn');
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	} else {
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		GMT_psbasemap('-Bg1a.1f.01:"X Magnetic Field [Gauss]":/g1a0.1f0.01:"Y Magnetic Field [Gauss]":WeSn');
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	}
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    GMT_unitcoords();																# horizontal field strength
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    GMT_pstext('-F+f12,Helvetica,blue+jTR -N');
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   	printf(GMT "0.98 0.98 HF = %.2f Gauss\n",$HF_mag);
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   	printf(GMT "0.98 0.94 $sensor_info\n")											# sensor info
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		if ($sensor_info ne '');
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    GMT_pstext('-F+f14,Helvetica,blue+jTL -N');										# profile id
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    printf(GMT "0.01 1.06 $P{profile_id}\n");
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	GMT_end();
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}
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sub rot_vecs(@) 																	# rotate & output IMU vector data 
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{
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	my($coord_trans,$min_elapsed,$max_elapsed,$plot_milapsed,$plot_malapsed) = @_;		# negate KVH pitch/roll data if first arg set to 1
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	$min_elapsed = 0 unless defined($min_elapsed);
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	$max_elapsed = 9e99 unless defined($max_elapsed);
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	$plot_milapsed = $min_elapsed unless defined($plot_milapsed);
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	$plot_malapsed = $max_elapsed unless defined($plot_malapsed);
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	while (&antsIn()) {
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		next if ($ants_[0][$elapsedF] < $min_elapsed);								# trim data
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		last if ($ants_[0][$elapsedF] > $max_elapsed);
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		my($cpiro) = -1;															# current pitch/roll accelerometer
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		my(@R); 																	# rotation matrix
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		for (my($i)=0; $i<@vecs; $i++) {											# rotate vector data
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			if ($piro[$i][0] != $cpiro) {											# next sensor chip
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				$cpiro = $piro[$i][0];
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				my($accX) = $ants_[0][$vecs[$cpiro][0]];
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				my($accY) = $ants_[0][$vecs[$cpiro][1]];
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				my($accZ) = $ants_[0][$vecs[$cpiro][2]];
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				if ($coord_trans == 2) {											# S/N 8 inside UL WH300
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					$accY *= -1; $accZ *= -1;
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				}
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				my($roll)  = atan2($accY,$accZ); 									# eqn 25 from Freescale AN3461
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				my($pitch) = atan2($accX,sqrt($accY**2+$accZ**2));     				# eqn 26 from <Freescale AN3461
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				if ($coord_trans == 1) {											# KVH
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					$pitch *= -1;
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					$roll  *= -1;
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                }
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				$ants_[0][$piro[$i][1]] = deg($pitch);								# add pitch/roll to data
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				$ants_[0][$piro[$i][2]] = deg($roll);
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				my($sp) = sin($pitch); my($cp) = cos($pitch);						# define rotation matrix
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				my($sr) = sin($roll);  my($cr) = cos($roll);
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				@R = ([ $cp,	 0,   -$sp	  ],
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					  [-$sp*$sr, $cr, -$cp*$sr],
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					  [ $sp*$cr, $sr,  $cp*$cr]);
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			}
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			my($xval) = $ants_[0][$vecs[$i][0]];
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			my($yval) = $ants_[0][$vecs[$i][1]];
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			my($zval) = $ants_[0][$vecs[$i][2]];
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			if ($coord_trans == 2) {												# S/N 8 inside UL WH300
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				$yval *= -1; $zval *= -1;
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			}
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			$ants_[0][$vecs[$i][0]] = ($xval-$bias[$i][0]) * $R[0][0] +
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									  ($yval-$bias[$i][1]) * $R[0][1] +
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									  ($zval-$bias[$i][2]) * $R[0][2];
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			$ants_[0][$vecs[$i][1]] = ($xval-$bias[$i][0]) * $R[1][0] +
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			  						  ($yval-$bias[$i][1]) * $R[1][1] +
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									  ($zval-$bias[$i][2]) * $R[1][2];
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			$ants_[0][$vecs[$i][2]] = ($xval-$bias[$i][0]) * $R[2][0] +
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									  ($yval-$bias[$i][1]) * $R[2][1] +
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									  ($zval-$bias[$i][2]) * $R[2][2];
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		}
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		my($magX) = $ants_[0][$magXF];
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		my($magY) = $ants_[0][$magYF];
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		my($magZ) = $ants_[0][$magZF];
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		my($accX) = $ants_[0][$accXF];
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		my($accY) = $ants_[0][$accYF];
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		my($accZ) = $ants_[0][$accZF];
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   166
A.M. Thurnherr <athurnherr@yahoo.com>
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		my($HF)   = sqrt($magX**2+$magY**2);
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		my($valid)= ($HF >= $minfac*$HF_mag) && ($HF <= $maxfac*$HF_mag);
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		my($hdg)  = $valid ? mag_heading($magX,$magY) : nan;
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   170
A.M. Thurnherr <athurnherr@yahoo.com>
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		&antsOut($ants_[0][$elapsedF]-$min_elapsed,$ants_[0][$tempF],
A.M. Thurnherr <athurnherr@yahoo.com>
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				 RDI_pitch($ants_[0][$pitchF],$ants_[0][$rollF]),$ants_[0][$rollF],
A.M. Thurnherr <athurnherr@yahoo.com>
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   173
				 $hdg,$accX,$accY,$accZ,$magX,$magY,$magZ,
A.M. Thurnherr <athurnherr@yahoo.com>
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   174
				 vel_u($HF,$hdg),vel_v($HF,$hdg),$valid);
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   175
A.M. Thurnherr <athurnherr@yahoo.com>
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   176
		pl_mag_calib_plot($valid,$magX,$magY)
A.M. Thurnherr <athurnherr@yahoo.com>
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   177
			if defined($P{profile_id}) &&
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				($ants_[0][$elapsedF] >= $plot_milapsed) &&
A.M. Thurnherr <athurnherr@yahoo.com>
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   179
				($ants_[0][$elapsedF] <= $plot_malapsed);
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   180
	}
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   181
}
A.M. Thurnherr <athurnherr@yahoo.com>
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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#----------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
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   184
# LADCP merging library
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   185
#----------------------------------------------------------------------
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   186
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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#-----------------------------------------------------
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   188
# Instrument Offset Estimation
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   189
#
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#	1: resolution of histogram in deg
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#		1 deg okay for good sensors
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#		2 deg sometimes required (2016 P18 003 2nd sensor)
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#	2: min tilt anom to consider for offset estimation
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   194
#		0.3 deg works even for calm casts
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#		increased values improve histogram
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   196
#		2.0 deg is too high for quiet casts (2016 P18 003)
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   197
#	3: minimum fraction of hist mode required
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#		10% default
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#		decreasing histogram resolution is better than
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#			decreasing this value, I think
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#-----------------------------------------------------
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A.M. Thurnherr <athurnherr@yahoo.com>
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#----------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
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# trim_out_of_water()
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#	- attempt to remove out-of-water records from time-series of
A.M. Thurnherr <athurnherr@yahoo.com>
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   206
#	  horizontal acceleration
A.M. Thurnherr <athurnherr@yahoo.com>
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   207
#----------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   208
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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sub trim_out_of_water($)
A.M. Thurnherr <athurnherr@yahoo.com>
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   210
{
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   211
	my($verbose) = @_;
A.M. Thurnherr <athurnherr@yahoo.com>
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   212
A.M. Thurnherr <athurnherr@yahoo.com>
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	#--------------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
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	# first-difference horizontal acceleration at full resolution to pass-filter
A.M. Thurnherr <athurnherr@yahoo.com>
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   215
	# dangling motion
A.M. Thurnherr <athurnherr@yahoo.com>
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   216
	#--------------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   217
A.M. Thurnherr <athurnherr@yahoo.com>
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	$IMP{Ah}[0] 	= sqrt($ants_[0][$accXF]**2+$ants_[0][$accYF]**2);
A.M. Thurnherr <athurnherr@yahoo.com>
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   219
	$IMP{dAhdt}[0]	= nan;
A.M. Thurnherr <athurnherr@yahoo.com>
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   220
	for (my($r)=1; $r<@ants_; $r++) {
A.M. Thurnherr <athurnherr@yahoo.com>
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   221
		$IMP{Ah}[$r] = sqrt($ants_[$r][$accXF]**2+$ants_[$r][$accYF]**2);
A.M. Thurnherr <athurnherr@yahoo.com>
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   222
		$IMP{dAhdt}[$r] = ($IMP{Ah}[$r]-$IMP{Ah}[$r-1]) / ($ants_[$r][$elapsedF]-$ants_[$r-1][$elapsedF]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   223
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   224
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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	#--------------------------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   226
	# create 10-s binned time series to calculate rms values of this quantity (dAhdt), and
A.M. Thurnherr <athurnherr@yahoo.com>
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   227
	# scale this with cos(sqrt($$pitch**2+$$roll**2)) to dampen underwater peaks (when the
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   228
	# instrument has a large tilt because it is being dragged)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   229
	#	NB: dAhdt, pitch and roll are only set up to last full bin (not so, sum and n)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   230
	#--------------------------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   231
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   232
	my(@dAhdt,@pitch,@roll,@dAhdt_rms);
A.M. Thurnherr <athurnherr@yahoo.com>
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   233
	my(@sum) = my(@sume) = my(@sump) = my(@sumr) = my(@n) = (0);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   234
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   235
	my($bin_start) = $ants_[0][$elapsedF];
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   236
	for (my($r)=1; $r<@ants_; $r++) {   
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   237
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   238
		if ($ants_[$r][$elapsedF] - $bin_start <= 10) { 						# within 10-s bin
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   239
			$sum[$#sum] += $IMP{dAhdt}[$r]; 									# sums
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   240
			$sume[$#sume] += $ants_[$r][$elapsedF];
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   241
			$sump[$#sump] += $ants_[$r][$pitchF];
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   242
			$sumr[$#sumr] += $ants_[$r][$rollF];
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   243
			$n[$#n]++;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   244
			next;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   245
		}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   246
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   247
		$dAhdt[$#sum] = $sum[$#sum] / $n[$#n];								# bin done => means
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   248
		$elapsed[$#sum] = $sume[$#sume] / $n[$#n];
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   249
		$pitch[$#sum] = $sump[$#sump] / $n[$#n];
A.M. Thurnherr <athurnherr@yahoo.com>
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   250
		$roll[$#sum] = $sumr[$#sumr] / $n[$#n];
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   251
	
A.M. Thurnherr <athurnherr@yahoo.com>
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   252
		my($sumsq) = 0; 													# sum of squares for rms(accel)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   253
		for (my($rr)=$r-$n[$#n]; $rr<$r; $rr++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   254
			$sumsq += ($IMP{dAhdt}[$rr] - $dAhdt[$#sum])**2;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   255
		}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   256
		$dAhdt_rms[$#sum] = sqrt($sumsq / $n[$#n]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   257
	    
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   258
		push(@sum,$IMP{dAhdt}[$r]); 										# begin next bin
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   259
		push(@sume,$ants_[$r][$elapsedF]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   260
		push(@sump,$ants_[$r][$pitchF]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   261
		push(@sumr,$ants_[$r][$rollF]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   262
		push(@n,1);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   263
		$bin_start = $ants_[$r][$elapsedF];
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   264
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   265
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   266
	#--------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   267
	# trim beginning/end when IMP is out of water
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   268
	#--------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   269
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   270
	my($i,$si);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   271
	for ($i=int(@dAhdt_rms/2); $i>0; $i--) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   272
		last if ($dAhdt_rms[$i] * cos(rad(sqrt($pitch[$i]**2+$roll[$i]**2))) > 1.0);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   273
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   274
	if ($dAhdt_rms[$i] * cos(rad(sqrt($pitch[$i]**2+$roll[$i]**2))) > 1.0) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   275
		for ($si=0; $ants_[$si][$elapsedF]<=$elapsed[$i]; $si++) {}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   276
		splice(@ants_,0,$si);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   277
		printf(STDERR "\n\t\t%5d  leading out-of-water IMU records removed",$si)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   278
			if ($si>0 && $verbose);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   279
	} else {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   280
		print(STDERR "\n\t\tWARNING: no leading out-of-water IMU records detected/removed") if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   281
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   282
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   283
	for ($i=int(@dAhdt_rms/2); $i<@dAhdt_rms; $i++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   284
		last if ($dAhdt_rms[$i] * cos(rad(sqrt($pitch[$i]**2+$roll[$i]**2))) > 1.0);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   285
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   286
	if ($dAhdt_rms[$i] * cos(rad(sqrt($pitch[$i]**2+$roll[$i]**2))) > 1.0) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   287
		for ($si=$#ants_; $ants_[$si][$elapsedF]>=$elapsed[$i]; $si--) {}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   288
		my($rem) = @ants_ - $si;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   289
		splice(@ants_,$si);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   290
		printf(STDERR "\n\t\t%5d trailing out-of-water IMU records removed",$rem)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   291
			if ($rem>0 && $verbose);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   292
	} else {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   293
		print(STDERR "\n\t\tWARNING: no trailing out-of-water IMU records detected/removed") if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   294
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   295
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   296
	printf(STDERR "\n\t\tcast duration		  : %.1f min",
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   297
		($ants_[$#ants_][$elapsedF] - $ants_[0][$elapsedF]) / 60)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   298
	        if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   299
}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   300
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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   301
#--------------------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   302
# prep_piro_IMP()
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   303
# 	- calculate pitch/roll offsets & tilt azimuth for IMP
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   304
#	- during an attempt to improve time lagging for the 2015 IOPAS data set,
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   305
#	  it was noticed that one particular instrument, WHM300#12973 maxes out
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   306
#	  pitch at 27.36 degrees, whereas the roll may not be maxed out at 28.76 deg,
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   307
#	  the max observed during the cruise.
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   308
#	- therefore, IMP{TILT_AZIM} and IMP{TILT_ANOM} are calculated here, first,
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   309
#	  with a pitch/roll cutoff value of 29 degrees
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   310
#	- after the time lagging, when the LADCP start and end times are known,
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   311
#	  the TILT values are re-calculated without the pitch/roll limit, and
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   312
#	  using only the correct time range
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   313
#---------------------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   314
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   315
sub prep_piro_IMP($)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   316
{
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   317
	my($verbose) = @_;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   318
	my($RDI_max_tilt) = 29; 
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   319
	my($IMP_pitch_mean,$IMP_roll_mean,$nPR) = (0,0,0);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   320
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   321
	for (my($r)=0; $r<@ants_; $r++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   322
		next unless numbersp($ants_[$r][$pitchF],$ants_[$r][$rollF]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   323
		$nPR++;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   324
		$IMP_pitch_mean += min($ants_[$r][$pitchF],$RDI_max_tilt);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   325
		$IMP_roll_mean	+= min($ants_[$r][$rollF],$RDI_max_tilt);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   326
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   327
	$IMP_pitch_mean /= $nPR;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   328
	$IMP_roll_mean /= $nPR;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   329
	printf(STDERR "\n\t\tIMU mean pitch/roll	  : %.1f/%.1f deg",$IMP_pitch_mean,$IMP_roll_mean)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   330
			if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   331
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   332
	for (my($r)=0; $r<@ants_; $r++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   333
		next unless numbersp($ants_[$r][$pitchF],$ants_[$r][$rollF]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   334
		$IMP{TILT_AZIMUTH}[$r] = tilt_azimuth(min($ants_[$r][$pitchF],$RDI_max_tilt)-$IMP_pitch_mean,
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   335
											  min($ants_[$r][$rollF],$RDI_max_tilt) -$IMP_roll_mean);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   336
		$IMP{TILT_ANOM}[$r] = angle_from_vertical(min($ants_[$r][$pitchF],$RDI_max_tilt)-$IMP_pitch_mean,
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   337
												  min($ants_[$r][$rollF],$RDI_max_tilt) -$IMP_roll_mean);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   338
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   339
	return ($IMP_pitch_mean,$IMP_roll_mean);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   340
}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   341
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   342
#----------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   343
# prep_piro_LADCP()
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   344
#	- calculate pitch/roll offsets & tilt azimuth of LADCP
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   345
#----------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   346
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   347
sub prep_piro_LADCP($)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   348
{
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   349
	my($verbose) = @_;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   350
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   351
	my($LADCP_pitch_mean,$LADCP_roll_mean) = (0,0);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   352
	for (my($ens)=$LADCP_begin; $ens<=$LADCP_end; $ens++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   353
		$LADCP{ENSEMBLE}[$ens]->{GIMBAL_PITCH} =
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   354
			gimbal_pitch($LADCP{ENSEMBLE}[$ens]->{PITCH},$LADCP{ENSEMBLE}[$ens]->{ROLL});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   355
		$LADCP_pitch_mean += $LADCP{ENSEMBLE}[$ens]->{GIMBAL_PITCH};
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   356
		$LADCP_roll_mean  += $LADCP{ENSEMBLE}[$ens]->{ROLL};
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   357
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   358
	$LADCP_pitch_mean /= ($LADCP_end-$LADCP_begin+1);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   359
	$LADCP_roll_mean  /= ($LADCP_end-$LADCP_begin+1);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   360
	printf(STDERR "\n\t\tLADCP mean pitch/roll	  : %.1f/%.1f deg",$LADCP_pitch_mean,$LADCP_roll_mean)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   361
			if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   362
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   363
	for (my($ens)=$LADCP_begin; $ens<=$LADCP_end; $ens++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   364
		$LADCP{ENSEMBLE}[$ens]->{TILT_AZIMUTH} =
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   365
			tilt_azimuth($LADCP{ENSEMBLE}[$ens]->{GIMBAL_PITCH}-$LADCP_pitch_mean,
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   366
						 $LADCP{ENSEMBLE}[$ens]->{ROLL}-$LADCP_roll_mean);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   367
		$LADCP{ENSEMBLE}[$ens]->{TILT_ANOM} =
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   368
			angle_from_vertical($LADCP{ENSEMBLE}[$ens]->{GIMBAL_PITCH}-$LADCP_pitch_mean,
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   369
								$LADCP{ENSEMBLE}[$ens]->{ROLL}-$LADCP_roll_mean);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   370
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   371
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   372
	print(STDERR "\n") if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   373
	return ($LADCP_pitch_mean,$LADCP_roll_mean);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   374
}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   375
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   376
#------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   377
# sub calc_hdg_offset()
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   378
#	- estimate heading offset from tilt time series
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   379
#	- returns heading offset and updated IMP mean tilts
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   380
#	- also creates diagnostic plot with pl_hdg_offset()
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   381
#------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   382
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   383
sub pl_hdg_offset($@)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   384
{
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   385
	my($dhist_binsize,$modefrac,@dhist) = @_;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   386
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   387
	my($plotsize) = '13c';
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   388
	my($xmin,$xmax) = (-180.5,180.5);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   389
	my($ymin) = 0;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   390
	my($ymax) = 1.05 * $dhist[$HDG_offset];
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   391
	    
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   392
	GMT_begin("$P{profile_id}${opt_a}_hdg_offset.ps","-JX${plotsize}","-R$xmin/$xmax/$ymin/$ymax",'-X6 -Y4 -P');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   393
	GMT_psxy("-Sb${dhist_binsize}u -GCornFlowerBlue");
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   394
	for (my($i)=0; $i<@dhist; $i++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   395
		next unless $dhist[$i];
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   396
		printf(GMT "%f $dhist[$i]\n",$i*$dhist_binsize>180 ? $i*$dhist_binsize-360 : $i*$dhist_binsize);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   397
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   398
	GMT_psbasemap('-Bg45a90f15:"IMU Heading Offset [\260]":/ga100f10:"Frequency":WeSn');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   399
	GMT_unitcoords();
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   400
	GMT_pstext('-F+f14,Helvetica,CornFlowerBlue+jTR -N');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   401
	printf(GMT "0.99 1.06 %g \260 offset (%d%% agreement)\n",angle($HDG_offset),100*$modefrac);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   402
	GMT_pstext('-F+f14,Helvetica,blue+jTL -N');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   403
	printf(GMT "0.01 1.06 $P{profile_id} $opt_a\n");
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   404
    GMT_end();
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   405
}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   406
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   407
sub calc_hdg_offset($)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   408
{
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   409
	my($verbose) = @_;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   410
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   411
	print(STDERR "\n\tRe-calculating IMU pitch/roll anomalies") if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   412
	($IMP_pitch_mean,$IMP_roll_mean,$nPR) = (0,0,0);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   413
	for (my($ens)=$LADCP_begin; $ens<=$LADCP_end; $ens++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   414
		my($r) = int(($LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} + $IMP{TIME_LAG} - $ants_[0][$elapsedF]) / $IMP{DT});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   415
		if ($r < 0 && $ens == $LADCP_begin) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   416
			$r = int(($LADCP{ENSEMBLE}[++$ens]->{ELAPSED_TIME} + $IMP{TIME_LAG} - $ants_[0][$elapsedF]) / $IMP{DT})
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   417
				while ($r < 0);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   418
			printf(STDERR "\n\tIMU data begin with instrument already in water => skipping %ds of LADCP data",
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   419
				$LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$LADCP_begin]->{ELAPSED_TIME})
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   420
					if ($verbose);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   421
			$LADCP_begin = $ens;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   422
		}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   423
		if ($r > $#ants_) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   424
			printf(STDERR "\n\tIMU data end while instrument is still in water => truncating %ds of LADCP data",
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   425
				$LADCP{ENSEMBLE}[$LADCP_end]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME})
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   426
					if ($verbose);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   427
			$LADCP_end = $ens - 1;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   428
			last;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   429
		}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   430
		next unless numberp($IMP{TILT_AZIMUTH}[$r]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   431
		$nPR++;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   432
		$IMP_pitch_mean += $ants_[$r][$pitchF];
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   433
		$IMP_roll_mean	+= $ants_[$r][$rollF];
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   434
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   435
	$IMP_pitch_mean /= $nPR;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   436
	$IMP_roll_mean /= $nPR;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   437
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   438
	for (my($ens)=$LADCP_begin; $ens<=$LADCP_end; $ens++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   439
		my($r) = int(($LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} + $IMP{TIME_LAG} - $ants_[0][$elapsedF]) / $IMP{DT});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   440
		next unless numberp($IMP{TILT_AZIMUTH}[$r]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   441
		$LADCP{ENSEMBLE}[$ens]->{IMP_TILT_AZIMUTH} =
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   442
			$IMP{TILT_AZIMUTH}[$r] = tilt_azimuth($ants_[$r][$pitchF]-$IMP_pitch_mean,
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   443
												  $ants_[$r][$rollF] -$IMP_roll_mean);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   444
		$LADCP{ENSEMBLE}[$ens]->{IMP_TILT_ANOM} =
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   445
			$IMP{TILT_ANOM}[$r] = angle_from_vertical($ants_[$r][$pitchF]-$IMP_pitch_mean,
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   446
													  $ants_[$r][$rollF] -$IMP_roll_mean);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   447
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   448
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   449
	printf(STDERR "\n\t\tIMU mean pitch/roll: %.1f/%.1f deg",$IMP_pitch_mean,$IMP_roll_mean)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   450
			if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   451
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   452
	if (defined($opt_s)) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   453
		$HDG_offset = $opt_s;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   454
		printf(STDERR "\n\tHEADING_OFFSET = %.1f (set by -s)\n",$HDG_offset) if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   455
	} else {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   456
		my($dhist_binsize,$dhist_min_pirom,$dhist_min_mfrac) = split(/,/,$opt_e);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   457
		croak("$0: cannot decode -e $opt_e\n")
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   458
			unless ($dhist_binsize > 0 && $dhist_min_pirom > 0 && $dhist_min_mfrac >= 0);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   459
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   460
		my(@dhist); my($nhist) = my($modeFreq) = 0;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   461
		for (my($ens)=$LADCP_begin; $ens<=$LADCP_end; $ens++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   462
			my($r) = int(($LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} + $IMP{TIME_LAG} - $ants_[0][$elapsedF]) / $IMP{DT});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   463
			next unless numberp($IMP{TILT_AZIMUTH}[$r]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   464
			next unless (abs($ants_[$r][$pitchF]-$IMP_pitch_mean) >= $dhist_min_pirom &&
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   465
						 abs($ants_[$r][$rollF] -$IMP_roll_mean) >= $dhist_min_pirom);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   466
			$dhist[int(angle_pos($LADCP{ENSEMBLE}[$ens]->{TILT_AZIMUTH}-$IMP{TILT_AZIMUTH}[$r])/$dhist_binsize+0.5)]++;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   467
			$nhist++;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   468
		}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   469
		croak("$0: empty histogram\n")
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   470
			unless ($nhist);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   471
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   472
		$HDG_offset = 0;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   473
		for (my($i)=1; $i<@dhist-1; $i++) { 							# make sure mode is not on edge
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   474
			$HDG_offset = $i if ($dhist[$i] >= $dhist[$HDG_offset]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   475
		}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   476
		my($modefrac) = ($dhist[$HDG_offset]+$dhist[$HDG_offset-1]+$dhist[$HDG_offset+1]) / $nhist;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   477
	    
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   478
		$HDG_offset *= $dhist_binsize;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   479
		pl_hdg_offset($dhist_binsize,$modefrac,@dhist);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   480
	    
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   481
		if ($opt_f) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   482
			printf(STDERR "\n\nIGNORED WARNING (-f): Cannot determine reliable heading offset; $HDG_offset+/-$dhist_binsize deg accounts for only %f%% of total\n",$modefrac*100)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   483
				if ($modefrac < $dhist_min_mfrac);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   484
		} else {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   485
			croak(sprintf("\n$0: Cannot determine reliable heading offset; $HDG_offset+/-$dhist_binsize deg accounts for only %f%% of total\n",$modefrac*100))
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   486
				if ($modefrac < $dhist_min_mfrac);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   487
		}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   488
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   489
		printf(STDERR "\n\t") if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   490
		printf(STDERR "IMU heading offset = %g deg (%d%% agreement)\n",angle($HDG_offset),100*$modefrac) if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   491
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   492
	return ($HDG_offset,$IMP_pitch_mean,$IMP_roll_mean);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   493
}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   494
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   495
#-----------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   496
# rot_IMP()
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   497
# 	- rotate IMP Data Into LADCP Instrument Coords
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   498
#	- also replaced pitch/roll by corresponding anomalies!!!
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   499
#-----------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   500
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   501
sub rot_IMP($)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   502
{
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   503
	my($verbose) = @_;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   504
	my($crho) = cos(rad($HDG_offset));
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   505
	my($srho) = sin(rad($HDG_offset));
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   506
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   507
	for (my($ens)=$LADCP_begin; $ens<=$LADCP_end; $ens++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   508
		my($r) = int(($LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} + $IMP{TIME_LAG} - $ants_[0][$elapsedF]) / $IMP{DT});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   509
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   510
		if (numbersp($ants_[$r][$pitchF],$ants_[$r][$rollF])) { 				# pitch/roll
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   511
			my($rot_p) = (($ants_[$r][$pitchF]-$IMP_pitch_mean)*$crho +
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   512
						  ($ants_[$r][$rollF]-$IMP_roll_mean)*$srho);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   513
			my($rot_r) = (-($ants_[$r][$pitchF]-$IMP_pitch_mean)*$srho +
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   514
						   ($ants_[$r][$rollF]-$IMP_roll_mean)*$crho);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   515
			$ants_[$r][$pitchF] = $rot_p;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   516
			$ants_[$r][$rollF]	= $rot_r;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   517
		}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   518
	    
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   519
		$ants_[$r][$hdgF] = angle_pos($ants_[$r][$hdgF] - $HDG_offset)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   520
			if numberp($ants_[$r][$hdgF]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   521
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   522
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   523
	my($rot_p) =  $IMP_pitch_mean * $crho + $IMP_roll_mean * $srho; 			# mean pitch roll
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   524
	my($rot_r) = -$IMP_pitch_mean * $srho + $IMP_roll_mean * $crho;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   525
	$IMP_pitch_mean = $rot_p;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   526
	$IMP_roll_mean	= $rot_r;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   527
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   528
	print(STDERR "\n") if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   529
	return ($IMP_pitch_mean,$IMP_roll_mean);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   530
}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   531
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   532
#----------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   533
# create_merge_plots()
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   534
#   - tilt time series (*_time_lag.ps)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   535
#----------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   536
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   537
sub create_merge_plots($$$)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   538
{
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   539
    my($basename,$plotsize,$verbose) = @_;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   540
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   541
	#---------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   542
	# Tilt Time Series (*_time_lag.ps)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   543
	#---------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   544
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   545
	my($mint,$maxt) = (99,-99);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   546
	for (my($ens)=$LADCP_begin; $ens<=$LADCP_end; $ens++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   547
		if (($LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$LADCP_begin]->{ELAPSED_TIME} <= 180) ||
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   548
			($LADCP{ENSEMBLE}[$LADCP_end]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} <= 180)) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   549
				$mint = $LADCP{ENSEMBLE}[$ens]->{IMP_TILT_ANOM} if ($LADCP{ENSEMBLE}[$ens]->{IMP_TILT_ANOM} < $mint);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   550
				$maxt = $LADCP{ENSEMBLE}[$ens]->{IMP_TILT_ANOM} if ($LADCP{ENSEMBLE}[$ens]->{IMP_TILT_ANOM} > $maxt);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   551
				$mint = $LADCP{ENSEMBLE}[$ens]->{TILT_ANOM} if ($LADCP{ENSEMBLE}[$ens]->{TILT_ANOM} < $mint);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   552
				$maxt = $LADCP{ENSEMBLE}[$ens]->{TILT_ANOM} if ($LADCP{ENSEMBLE}[$ens]->{TILT_ANOM} > $maxt);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   553
		}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   554
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   555
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   556
	my($xmin,$xmax) = (-90,90);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   557
	my($ymin) = round($mint-0.5);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   558
	my($ymax) = round($maxt+0.5);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   559
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   560
	GMT_begin("${basename}_time_lag.ps","-JX${plotsize}","-R$xmin/$xmax/$ymin/$ymax",'-X6 -Y4 -P');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   561
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   562
	GMT_psxy('-W2,coral');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   563
	for (my($ens) = $LADCP_begin + 5; 
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   564
		 $LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$LADCP_begin]->{ELAPSED_TIME} <= 90;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   565
		 $ens++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   566
			printf(GMT "%f %f\n",$LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$LADCP_begin]->{ELAPSED_TIME},
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   567
								 $LADCP{ENSEMBLE}[$ens]->{IMP_TILT_ANOM});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   568
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   569
	GMT_psxy('-W1');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   570
	for (my($ens) = $LADCP_begin + 5; 
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   571
		 $LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$LADCP_begin]->{ELAPSED_TIME} <= 90;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   572
		 $ens++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   573
			printf(GMT "%f %f\n",$LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$LADCP_begin]->{ELAPSED_TIME},
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   574
								 $LADCP{ENSEMBLE}[$ens]->{TILT_ANOM});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   575
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   576
	GMT_psxy('-W2,SeaGreen');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   577
	for (my($ens) = $LADCP_end - 5; 
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   578
		 $LADCP{ENSEMBLE}[$LADCP_end]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} <= 90;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   579
		 $ens--) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   580
			printf(GMT "%f %f\n",$LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$LADCP_end]->{ELAPSED_TIME},
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   581
								 $LADCP{ENSEMBLE}[$ens]->{IMP_TILT_ANOM});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   582
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   583
	GMT_psxy('-W1');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   584
	for (my($ens) = $LADCP_end - 5; 
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   585
		 $LADCP{ENSEMBLE}[$LADCP_end]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} <= 90;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   586
		 $ens--) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   587
			printf(GMT "%f %f\n",$LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$LADCP_end]->{ELAPSED_TIME},
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   588
								 $LADCP{ENSEMBLE}[$ens]->{TILT_ANOM});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   589
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   590
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   591
    GMT_psbasemap('-Bg30a30f10:"Elapsed Time [sec]":/g5a5f1:"Tilt Magnitude [\260]":WeSn');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   592
	GMT_unitcoords();
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   593
    GMT_pstext('-F+f14,Helvetica,Coral+jTL');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   594
	    printf(GMT "0.52 0.98 downcast\n");
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   595
    GMT_pstext('-F+f14,Helvetica,SeaGreen+jTR');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   596
	    printf(GMT "0.48 0.98 upcast\n");	    
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   597
	GMT_psxy('-W4,LightSkyBlue');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   598
		printf(GMT "0.5 0\n0.5 1\n");
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   599
    GMT_pstext('-F+f14,Helvetica,blue+jTL -N');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   600
	    printf(GMT "0.01 1.06 $P{profile_id} $opt_a\n");
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   601
	GMT_end();
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   602
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   603
	#------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   604
	# Heading Errors (*_hdg_err.ps)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   605
	#------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   606
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   607
	my(@err_binned,@err_nsamp);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   608
	my($sumErr) = 0; my($nErr) = $LADCP_end - $LADCP_begin + 1;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   609
	for (my($ens)=$LADCP_begin; $ens<=$LADCP_end; $ens++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   610
		next unless ($LADCP{ENSEMBLE}[$ens]->{TILT_ANOM} < 10);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   611
		my($r) = int(($LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} + $IMP{TIME_LAG} - $ants_[0][$elapsedF]) / $IMP{DT});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   612
		my($bi) = int($ants_[$r][$hdgF]/5);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   613
		my($err) = angle_diff($ants_[$r][$hdgF],$LADCP{ENSEMBLE}[$ens]->{HEADING});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   614
		next unless numberp($err);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   615
		$err_binned[$bi] += $err; $sumErr += $err;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   616
		$err_nsamp[$bi]++;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   617
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   618
	for (my($bi)=0; $bi<@err_nsamp; $bi++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   619
		$err_binned[$bi] = ($err_nsamp[$bi] >= 5)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   620
						 ? $err_binned[$bi]/$err_nsamp[$bi]
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   621
						 : undef;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   622
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   623
	my(@err_dssq);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   624
	for (my($ens)=$LADCP_begin; $ens<=$LADCP_end; $ens++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   625
		next unless ($LADCP{ENSEMBLE}[$ens]->{TILT_ANOM} < 10);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   626
		my($r) = int(($LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} + $IMP{TIME_LAG} - $ants_[0][$elapsedF]) / $IMP{DT});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   627
		my($bi) = int($ants_[$r][$hdgF]/5);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   628
		my($err) = angle_diff($ants_[$r][$hdgF],$LADCP{ENSEMBLE}[$ens]->{HEADING});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   629
		next unless numberp($err);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   630
		$err_dssq[$bi] += ($err-$err_binned[$bi])**2;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   631
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   632
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   633
	my($xmin,$xmax) = (0,360);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   634
	my($ymin,$ymax) = (-45,45);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   635
	GMT_begin("${basename}_hdg_err.ps","-JX${plotsize}","-R$xmin/$xmax/$ymin/$ymax",'-X6 -Y4 -P');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   636
	GMT_psxy('-Ey/3,CornFlowerBlue');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   637
	my($sumSq,$sumBe) = my($nSq,$nBe) = (0,0);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   638
	for (my($bi)=0; $bi<@err_binned; $bi++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   639
		next unless ($err_nsamp[$bi] >= 2);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   640
		next unless numberp($err_binned[$bi]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   641
		$sumSq += $err_binned[$bi]**2; $nSq++;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   642
		$sumBe += $err_binned[$bi]; $nBe++;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   643
#		printf(GMT "%f %f\n",2.5+5*$bi,$err_binned[$bi]);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   644
		printf(GMT "%f %f %f\n",2.5+5*$bi,$err_binned[$bi],sqrt($err_dssq[$bi]/($err_nsamp[$bi]-1)));
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   645
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   646
    GMT_psbasemap('-Bg90a45f5:"ADCP Heading [\260]":/g15a15f5:"ADCP Compass Error [\260]":WeSn');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   647
	GMT_unitcoords();
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   648
    GMT_pstext('-F+f12,Helvetica,CornFlowerBlue+jTR -Gwhite -C25%');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   649
    printf(GMT "0.98 0.98 rms error = %7.1f \260\n",sqrt($sumSq/$nSq));
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   650
    printf(GMT "0.98 0.94 time-averaged error = %7.1f \260\n",$sumErr/$nErr);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   651
    printf(GMT "0.98 0.90 heading-averaged error = %7.1f \260\n",$sumBe/$nBe);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   652
    GMT_pstext('-F+f14,Helvetica,blue+jTL -N');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   653
    printf(GMT "0.01 1.06 $P{profile_id} $opt_a\n");
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   654
    GMT_end();
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   655
	                        
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   656
	print(STDERR "\n") if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   657
}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   658
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   659
#----------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   660
# output_merged()
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   661
#	- output merged data
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   662
#----------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   663
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   664
sub output_merged($)
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   665
{
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   666
	my($verbose) = @_;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   667
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   668
	my($tazimF)		= &antsNewField('tilt_azimuth');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   669
	my($tanomF)		= &antsNewField('tilt_magnitude');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   670
	my($L_tazimF) 	= &antsNewField('LADCP_tilt_azimuth');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   671
	my($L_tanomF) 	= &antsNewField('LADCP_tilt_magnitude');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   672
	my($L_elapsedF) = &antsNewField('LADCP_elapsed');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   673
	my($L_ensF) 	= &antsNewField('LADCP_ens');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   674
	my($L_depthF) 	= &antsNewField('LADCP_depth_estimate');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   675
	my($L_pitchF)	= &antsNewField('LADCP_pitch');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   676
	my($L_rollF)	= &antsNewField('LADCP_roll');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   677
	my($L_hdgF)		= &antsNewField('LADCP_hdg');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   678
	my($dcF)		= &antsNewField('downcast');
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   679
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   680
	for (my($ens)=0; $ens<=$#{$LADCP{ENSEMBLE}}; $ens++) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   681
		my($r) = int(($LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} + $IMP{TIME_LAG} - $ants_[0][$elapsedF]) / $IMP{DT});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   682
#		print(STDERR "$r\[$ens\,$LADCP{ENSEMBLE}[$ens]->{NUMBER}] = int(($LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} + $IMP{TIME_LAG} - $ants_[0][$elapsedF]) / $IMP{DT});\n");
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   683
		if ($r<0 || $r>$#ants_) {												# ensemble beyond limits of IMU data
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   684
			my(@out);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   685
			if ($ens >= $LADCP_begin && $ens <= $LADCP_end) {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   686
				$out[$elapsedF] 	= $LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} + $IMP{TIME_LAG};
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   687
				$out[$L_elapsedF] 	= $LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME};
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   688
			}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   689
			$out[$L_ensF]			= $LADCP{ENSEMBLE}[$ens]->{NUMBER};
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   690
			$out[$dcF]				= ($ens <= $LADCP_bottom);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   691
			&antsOut(@out);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   692
		} elsif ($ens < $LADCP_begin || $ens > $LADCP_end) {					# pre deplyment or post recovery
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   693
			$ants_[$r][$L_elapsedF] = undef;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   694
			$ants_[$r][$L_ensF] 	= $LADCP{ENSEMBLE}[$ens]->{NUMBER};
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   695
			$ants_[$r][$L_pitchF]	= $LADCP{ENSEMBLE}[$ens]->{GIMBAL_PITCH} - $LADCP_pitch_mean;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   696
			$ants_[$r][$L_rollF]	= $LADCP{ENSEMBLE}[$ens]->{ROLL} - $LADCP_roll_mean;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   697
			$ants_[$r][$L_hdgF] 	= $LADCP{ENSEMBLE}[$ens]->{HEADING};							    
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   698
			$ants_[$r][$dcF]        = nan;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   699
			&antsOut(@{$ants_[$r]});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   700
		} else {
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   701
			$ants_[$r][$tazimF] 	= angle($LADCP{ENSEMBLE}[$ens]->{IMP_TILT_AZIMUTH} + $HDG_offset);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   702
			$ants_[$r][$tanomF] 	= $LADCP{ENSEMBLE}[$ens]->{IMP_TILT_ANOM};
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   703
			$ants_[$r][$L_tazimF]	= $LADCP{ENSEMBLE}[$ens]->{TILT_AZIMUTH};
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   704
			$ants_[$r][$L_tanomF]	= $LADCP{ENSEMBLE}[$ens]->{TILT_ANOM};
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   705
			$ants_[$r][$L_elapsedF] = $LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME};
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   706
			$ants_[$r][$L_ensF] 	= $LADCP{ENSEMBLE}[$ens]->{NUMBER};
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   707
			$ants_[$r][$L_depthF]	= $LADCP{ENSEMBLE}[$ens]->{DEPTH};
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   708
			$ants_[$r][$L_pitchF]	= $LADCP{ENSEMBLE}[$ens]->{GIMBAL_PITCH} - $LADCP_pitch_mean;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   709
			$ants_[$r][$L_rollF]	= $LADCP{ENSEMBLE}[$ens]->{ROLL} - $LADCP_roll_mean;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   710
			$ants_[$r][$L_hdgF] 	= $LADCP{ENSEMBLE}[$ens]->{HEADING};							    
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   711
			$ants_[$r][$dcF]        = ($ens <= $LADCP_bottom);
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   712
			&antsOut(@{$ants_[$r]});
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   713
		}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   714
	}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   715
	
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   716
	print(STDERR "\n") if $verbose;
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   717
}
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   718
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   719
#----------------------------------------------------------------------
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   720
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff changeset
   721
1; # return true for all the world to see