LADCPproc.backscatter
author A.M. Thurnherr <athurnherr@yahoo.com>
Fri, 17 Jun 2011 13:33:04 -0400
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pre IWISE
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#======================================================================
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#                    L A D C P P R O C . B A C K S C A T T E R 
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#                    doc: Wed Oct 20 13:02:27 2010
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#                    dlm: Wed Jun 15 15:31:43 2011
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#                    (c) 2010 A.M. Thurnherr
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#                    uE-Info: 67 0 NIL 0 0 72 2 2 4 NIL ofnI
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#======================================================================
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# HISTORY:
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#	Oct 20, 2010: - created
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#	Dec 10, 2010: - BUG: backscatter above sea surface made code bomb
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#						 when run with uplooker data
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#	Jun 15, 2011: - added calculation of backscatter profiles from
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#				    subset of bins
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#----------------------------------------------------------------------
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# Volume Scattering Coefficient, following Deines (IEEE 1999)
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# NOTES:
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#	- instrument specific! (300kHz Workhorse)
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#   - no sound-speed correction applied
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#   - R in bin center, instead of last quarter
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#   - transmit power assumes 33V batteries
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#----------------------------------------------------------------------
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# NB:
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#	- correction seems to work for a subset of bins (~bins 3-9 for 
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#	  2010 P403 station 46) 
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#	- this may imply that noise level depends on bin
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# 	- far bins are important for seabed detection, i.e. cannot simply
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#	  be discarded at this stage
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sub log10 {
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    my $n = shift;
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    return log($n)/log(10);
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}   
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sub Sv($$$$$)
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{
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    my($temp,$PL,$Er,$R,$EA) = @_;
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    my($C)      = -143;                 # RDI Workhorse monitor
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    my($Ldbm)   = 10 * log10($PL);
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    my($PdbW)   = 14.0;
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    my($alpha)  = 0.069;
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    my($Kc)     = 0.45;
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    return $C + 10*log10(($temp+273)*$R**2) - $Ldbm - $PdbW
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              + 2*$alpha*$R + $Kc*($EA-$Er);
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}
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sub mk_backscatter_profs($$)
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{
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	my($LADCP_start,$LADCP_end) = @_;
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	my(@Er) = (1e99,1e99,1e99,1e99);						# echo intensity reference level
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	for (my($ens)=$LADCP_start; $ens<=$LADCP_end; $ens++) {
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		$Er[0] = $LADCP{ENSEMBLE}[$ens]->{ECHO_AMPLITUDE}[$LADCP{N_BINS}-1][0]
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			if ($LADCP{ENSEMBLE}[$ens]->{ECHO_AMPLITUDE}[$LADCP{N_BINS}-1][0] < $Er[0]);
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		$Er[1] = $LADCP{ENSEMBLE}[$ens]->{ECHO_AMPLITUDE}[$LADCP{N_BINS}-1][1]
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			if ($LADCP{ENSEMBLE}[$ens]->{ECHO_AMPLITUDE}[$LADCP{N_BINS}-1][1] < $Er[1]);
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		$Er[2] = $LADCP{ENSEMBLE}[$ens]->{ECHO_AMPLITUDE}[$LADCP{N_BINS}-1][2]
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			if ($LADCP{ENSEMBLE}[$ens]->{ECHO_AMPLITUDE}[$LADCP{N_BINS}-1][2] < $Er[2]);
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		$Er[3] = $LADCP{ENSEMBLE}[$ens]->{ECHO_AMPLITUDE}[$LADCP{N_BINS}-1][3]
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			if ($LADCP{ENSEMBLE}[$ens]->{ECHO_AMPLITUDE}[$LADCP{N_BINS}-1][3] < $Er[3]);
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    }
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	print(STDERR "\n\t\@per-beam noise levels = @Er") if ($opt_d);
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	for (my($ens)=$LADCP_start; $ens<=$LADCP_end; $ens++) {
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		for (my($bin)=0; $bin<$LADCP{N_BINS}; $bin++) {
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			my($gi) = int(&depthOfBin($ens,$bin) / $GRID_DZ);
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			next if ($gi < 0);
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			my($range_to_bin) = &dzToBin($ens,$bin) / cos(rad($LADCP{BEAM_ANGLE}));
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			my($Sv) = Sv($LADCP{ENSEMBLE}[$ens]->{CTD_TEMP},
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						 $LADCP{TRANSMITTED_PULSE_LENGTH},
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						 $Er[0],$range_to_bin,
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						 $LADCP{ENSEMBLE}[$ens]->{ECHO_AMPLITUDE}[$bin][0])/4 +
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					  Sv($LADCP{ENSEMBLE}[$ens]->{CTD_TEMP},
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						 $LADCP{TRANSMITTED_PULSE_LENGTH},
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						 $Er[1],$range_to_bin,
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						 $LADCP{ENSEMBLE}[$ens]->{ECHO_AMPLITUDE}[$bin][1])/4 +
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					  Sv($LADCP{ENSEMBLE}[$ens]->{CTD_TEMP},
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						 $LADCP{TRANSMITTED_PULSE_LENGTH},
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						 $Er[2],$range_to_bin,
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						 $LADCP{ENSEMBLE}[$ens]->{ECHO_AMPLITUDE}[$bin][2])/4 +
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					  Sv($LADCP{ENSEMBLE}[$ens]->{CTD_TEMP},
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						 $LADCP{TRANSMITTED_PULSE_LENGTH},
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						 $Er[3],$range_to_bin,
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                         $LADCP{ENSEMBLE}[$ens]->{ECHO_AMPLITUDE}[$bin][3])/4;
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			$sSv[$gi][$bin] += $Sv;
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			$nSv[$gi][$bin]++;
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			if ($bin>=$Svbin_start && $bin<=$Svbin_end) {
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				$sSv_prof[$gi] += $Sv;
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				$nSv_prof[$gi]++;
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			}
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		}
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	}
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}
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sub depthOfGI($) { return $_[0]*$GRID_DZ + $GRID_DZ/2; }		# depth corresponding to particular grid index
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sub find_backscatter_seabed($)
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{
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	my($search_below) = @_;
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	my($mdgi) = int($search_below/$GRID_DZ);					# grid index to begin search
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	my(@wdepth_gi);												# water_depth indices
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	print(STDERR "\n\tseabed-max grid indices:") if ($opt_d);
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	for (my($bin)=0; $bin<$LADCP{N_BINS}; $bin++) { 			# find backscatter min/max below $search_below in each bin
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		my($min,$max,$gimax,$lastvalid) = (1e99,-1e99,-1,-1);
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		for (my($gi)=$mdgi; $gi<@nSv; $gi++) {
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			next unless ($nSv[$gi][$bin] > 0);
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			my($avg) = $sSv[$gi][$bin] / $nSv[$gi][$bin];
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			$lastvalid = $gi;
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			$min = $avg if ($avg < $min);
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			$max = $avg, $gimax = $gi if ($avg > $max);
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		}
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		if ($max-$min>10 && $gimax!=$lastvalid) { 				# ignore boundary maxima & scatter
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			printf(STDERR " %d",$gimax-$mdgi) if ($opt_d);
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			push(@wdepth_gi,$gimax);
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		}
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	}
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	return (depthOfGI(avg(@wdepth_gi)),stddev(@wdepth_gi)*$GRID_DZ);
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}
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1;