function p=checkbtrk(d,di,de,dr,p);

% compare RDI to own bottom track

% 

%======================================================================

%                    C H E C K B T R K . M 

%                    doc: Sat Jul  3 23:57:25 2004

%                    dlm: Fri Oct  1 20:54:13 2010

%                    (c) 2004 ladcp@

%                    uE-Info: 22 24 NIL 0 0 72 0 2 8 NIL ofnI

%======================================================================

% CHANGES BY ANT:

%  Jul  4, 2004: - adapted to [edit_data.m], i.e. plot unedited data

%		   in black & edited in blue; also use unedited data

%		   to calculate bias slope

%  Jul 16, 2004: - adapted to changes in [edit_data.m]

%  Mar  5, 2010: - debugging???

%  Oct  1, 2010: - BUG: code bombed when bottom was detected (i.e. p.zbottom

%			was set) but when all these bottom returns turned out

%			to be outside the valid range (i.e. almost certainly 

%			false)

if ~existf(p,'zbottom'), return , end

if ~isfinite(p.zbottom), return, end

if ~existf(d,'bvel_own'), d.bvel_own=d.bvel*nan; d.hbot_own=d.hbot*nan; end

if ~existf(d,'bvel_rdi'), d.bvel_rdi=d.bvel*nan; d.hbot_rdi=d.hbot*nan; end

  ii=find(abs(d.z+p.zbottom)<max(p.btrk_range) & ...

          abs(d.z+p.zbottom)>min(p.btrk_range));

  if isempty(ii), p.zbottom = nan, return, end

  if existf(d,'bvel_rdi')

   bu_rdi=d.bvel_rdi(ii,1);

   bv_rdi=d.bvel_rdi(ii,2);

   bw_rdi=d.bvel_rdi(ii,3);

  else

   bu_rdi=d.bvel(ii,1)*nan;

   bv_rdi=d.bvel(ii,2)*nan;

   bw_rdi=d.bvel(ii,3)*nan;

  end

  if existf(d,'hbot_rdi')

   bh_rdi=d.hbot_rdi(ii);

  else

   bh_rdi=d.hbot(ii)*nan;

  end

  u_o=interp1(dr.z,dr.u,-d.z(ii)');

  u_c=-interp1(dr.tim',dr.uctd',d.time_jul(ii)');

  bu_own=d.bvel_own(ii,1);

  bv_own=d.bvel_own(ii,2);

  bw_own=d.bvel_own(ii,3);

  bh_own=d.hbot_own(ii);

  v_o=interp1(dr.z,dr.v,-d.z(ii)');

  v_c=-interp1(dr.tim',dr.vctd',d.time_jul(ii)');

  rw=d.rw(d.izd,ii);

  ij=find((d.izm(d.izd,ii)+p.zbottom)<d.zd(1));

  rw(ij)=nan;

  if existf(d,'wctd') ==-1

   w_c=d.wctd(ii)';

   disp(' use CTD pressure derived W')

  else

   w_c=medianan(rw,3)';

   disp(' use reference layer W')

  end

  w_c2=w_c-[0;diff(w_c)/2 ];

  bu_used=d.bvel(ii,1);

  bv_used=d.bvel(ii,2);

  bw_used=d.bvel(ii,3);

  bh_used=d.hbot(ii);

  blen=d.down.Cell_length/100;

% extract raw velocity data near bottom

rube = d.ru(d.izd,ii);

rvbe = d.rv(d.izd,ii);

rwbe = d.rw(d.izd,ii);

% the same, but only velocities that passed editing

ru = d.ru; ru(find(~isfinite(d.weight))) = NaN; ru = ru(d.izd,ii);

rv = d.rv; rv(find(~isfinite(d.weight))) = NaN; rv = rv(d.izd,ii);

rw = d.rw; rw(find(~isfinite(d.weight))) = NaN; rw = rw(d.izd,ii);

% correct velocities with solved U_ctd

rua=ru-repmat(u_c',[length(d.izd) 1]); ruabe=rube-repmat(u_c',[length(d.izd) 1]);

rva=rv-repmat(v_c',[length(d.izd) 1]); rvabe=rvbe-repmat(v_c',[length(d.izd) 1]);

rwa=rw-repmat(w_c',[length(d.izd) 1]); rwabe=rwbe-repmat(w_c',[length(d.izd) 1]);

rwan=abs(rw)./abs(repmat(w_c',[length(d.izd) 1]));

rwanbe=abs(rwbe)./abs(repmat(w_c',[length(d.izd) 1]));

bua_rdi=bu_rdi-u_c;

bva_rdi=bv_rdi-v_c;

% try to use w inbetween pings for real bottom track

bwa1_rdi=bw_rdi-w_c;

bwa2_rdi=bw_rdi-w_c2;

if stdnan(bwa1_rdi)>stdnan(bwa2_rdi)

 bwa_rdi=bwa2_rdi;

 disp(' use inbetween w-ref')

else

 bwa_rdi=bwa1_rdi;

end

bua_own=bu_own-u_c;

bva_own=bv_own-v_c;

bwa_own=bw_own-w_c;

bua_used=bu_used-u_c;

bva_used=bv_used-v_c;

bwa_used=bw_used-w_c;

% save bias and std of bottom track anomaly

p.btrk_u_bias=medianan(bua_used,6);

p.btrk_u_std=stdnan(bua_used);

p.btrk_v_bias=medianan(bva_used,6);

p.btrk_v_std=stdnan(bva_used);

p.btrk_w_bias=medianan(bwa_used,6);

p.btrk_w_std=stdnan(bwa_used);

disp(['CHECKBTRK: check bottom track against U_ctd solution '])

disp([' profiles within give acceptable range: ',int2str(length(ii))])

disp(['  U bias :',num3str(p.btrk_u_bias,6,3),' [m/s]  std: ',...

       num3str(p.btrk_u_std,5,3),' [m/s]'])

disp(['  V bias :',num3str(p.btrk_v_bias,6,3),' [m/s]  std: ',...

       num3str(p.btrk_v_std,5,3),' [m/s]'])

disp(['  W bias :',num3str(p.btrk_w_bias,6,3),' [m/s]  std: ',...

       num3str(p.btrk_w_std,5,3),' [m/s]'])

if abs(p.btrk_u_bias)>0.1

 warn=[' large U bottom track bias ',num2str(p.btrk_u_bias)];

 disp(warn)

 p.warnp(size(p.warnp,1)+1,1:length(warn))=warn;

end

if abs(p.btrk_v_bias)>0.1

 warn=[' large V bottom track bias ',num2str(p.btrk_v_bias)];

 disp(warn)

 p.warnp(size(p.warnp,1)+1,1:length(warn))=warn;

end

% correct nominal depth with detected bottom depth

izm=d.izm(d.izd,ii);

zcor=(-d.hbot(ii)+d.z(ii));

zcor_std=stdnan(zcor);

p.btrk_rough=zcor_std;

izm=izm-repmat(zcor,[length(d.izd) 1]);

% compute bias W slope

 dz=abs(diff(d.zd(1:2)));

 wbias=[];

 zbias=[];

 nbias=[];

 for i=1:6

  dzi=dz*i/2;

  ij=find(abs(izm+dzi)<(dz/4));

  nok=sum(isfinite(rwanbe(ij)));

  if nok>5

   wbias=[wbias, 1-medianan(rwanbe(ij))];

   zbias=[zbias, dzi];

   nbias=[nbias, nok];

  end

 end

 if exist('wbias')==1

  p.wbslope=polyfit(zbias,wbias,1);

 else

  wbias=nan;

  zbias=nan;

  p.wbslope=[nan nan];

 end

disp(['  W slope fact :',num3str(p.wbslope(1),6,4),' [1/m] lower W below bottom '])

% compute 'wave' action

p.btrk_wdiff=medianan(abs(diff(w_c)));

disp(['  W diff :',num3str(p.btrk_wdiff,6,4),' [m/s] ping to ping w difference '])

disp(['  H std :',num3str(zcor_std,6,1),' [m]  large means bottom is rough/sloped'])

p.btrk_tilt_mean=mean(d.tilt(ii));

p.btrk_tilt_std=std(d.tilt(ii));

disp(['  Tilt mean :',num3str(p.btrk_tilt_mean,3,1),' +/- ',...

           num3str(p.btrk_tilt_std,3,1),' [^o]  '])

% select bins used for own bottom track

iz=find(abs(izm+blen*p.btrk_below)<blen);

% plot results

tx2=0.25;

figure(13)

clf

 subplot(221); hold on;

 plot(ruabe,izm,'.k');			% all velocities

 plot(rua,izm,'.g'); 			% edited velocities

 plot(ruabe(iz),izm(iz),'.r');		% used-for-BT velocities

 axis tight;

 ax=axis;

 ax(1:2)=[-1 1]*0.8;

 ax(3)=-160;

 ax(4)=50;

 vh=floor(ax(1)*20)/20+0.0125 : 0.025: ceil(ax(2)*20)/20;

 plot(ax(1:2),[0 0],'-')

 plot([0 0],ax(3:4),'k-','linewidth',1.5)

 plot([0 0]+p.btrk_u_bias,ax(3:4),'r-','linewidth',1.5)

 text(tx2,10,' Bottom')

 if sum(isfinite(bua_rdi))>0

  [y,x]=hist(bua_rdi,vh);

  y([1,end])=0;

  ys=sum(y);

  [x,y]=stairs(x,y);

  fill(x,y/max(y)*30-50,'-g')

  plot([0 0]+medianan(bua_rdi,6),ax(3:4),'-g')

  text(tx2,-40,['RDI n: ',int2str(ys)])

  text(0.1,-10,[' bias ',num3str(medianan(bua_rdi,6),6,3)],'color','g')

 end

 [y,x]=hist(bua_own,vh);

 y([1,end])=0;

 ys=sum(y);

 [x,y]=stairs(x,y);

 fill(x,y/max(y)*30-100,'-b')

 plot([0 0]+medianan(bua_own,6),ax(3:4),'-b')

 text(tx2,-90,[' own n: ',int2str(ys)])

 text(0.1,-60,[' bias ',num3str(medianan(bua_own,6),6,3)],'color','b')

 [y,x]=hist(real(de.bvel-de.uctd(:,1).'),vh);

 y([1,end])=0;

 ys=sum(y);

 [x,y]=stairs(x,y);

 fill(x,y/max(y)*30-150,'-r')

 text(tx2,-140,['Sup. ens. n: ',int2str(ys)])

 text(0.1,-110,[' bias ',num3str(p.btrk_u_bias,6,3)],'color','r')

 title([' U bot-tr mean U_{ctd} : ',num3str(-meannan(real(de.uctd(:,1))),4,2),...

        ' [m/s] added'])

 xlabel(' U [m/s]')

 ylabel('depth [m]')

 axis(ax)

 text(-0.7,-154,['Bottom roughness: ',int2str(p.btrk_rough),' [m]'])

subplot(222); hold on;

 plot(rvabe,izm,'.k'); 			% all velocities

 plot(rva,izm,'.g'); 			% edited velocities

 plot(rva(iz),izm(iz),'.r')		% used-for-BT velocities

 axis tight

 ax=axis;

 ax(1:2)=[-1 1]*0.8;

 ax(3)=-160;

 ax(4)=50;

 plot(ax(1:2),[0 0],'-')

 plot([0 0],ax(3:4),'k-')

 plot([0 0]+p.btrk_v_bias,ax(3:4),'r-','linewidth',1.5)

 text(tx2,10,' Bottom')

 if sum(isfinite(bva_rdi))>0

  [y,x]=hist(bva_rdi,vh);

  y([1,end])=0;

  ys=sum(y);

  [x,y]=stairs(x,y);

  fill(x,y/max(y)*30-50,'-g')

  plot([0 0]+medianan(bva_rdi,6),ax(3:4),'-g')

  text(tx2,-40,[' RDI n: ',int2str(ys)])

  text(0.1,-10,[' bias ',num3str(medianan(bva_rdi,6),6,3)],'color','g')

 end

 [y,x]=hist(bva_own,vh);

 y([1,end])=0;

 ys=sum(y);

 [x,y]=stairs(x,y);

 fill(x,y/max(y)*30-100,'-b')

 plot([0 0]+medianan(bva_own,6),ax(3:4),'-b')

 text(tx2,-90,[' own n: ',int2str(ys)])

 text(0.1,-60,[' bias ',num3str(medianan(bva_own,6),6,3)],'color','b')

 [y,x]=hist(imag(de.bvel-de.uctd(:,1).'),vh);

 y([1,end])=0;

 ys=sum(y);

 [x,y]=stairs(x,y);

 fill(x,y/max(y)*30-150,'-r')

 text(tx2,-140,['Sup. ens. n: ',int2str(ys)])

 text(0.1,-110,[' bias ',num3str(p.btrk_v_bias,6,3)],'color','r')

 title([' V bot-tr mean V_{ctd} : ',num3str(-meannan(imag(de.uctd(:,1))),4,2),...

        ' [m/s] added'])

 xlabel(' V [m/s]')

 ylabel('depth [m]')

 text(-0.7,-154,['Tilt : ',num3str(p.btrk_tilt_mean,3,1),' +/- ',...

                 num3str(p.btrk_tilt_std,3,1),' [^o]'])

 axis(ax)

tx2=0.05;

subplot(223); hold on;

 plot(rwabe,izm,'.k');				% all velocities

 plot(rwa,izm,'.g');				% edited velocities

 plot(rwa(iz),izm(iz),'.r');			% used-for-BT velocities

 axis tight

 ax=axis;

 ax(1:2)=[-1 1]*0.4;

 vh=floor(ax(1)*20)/20+0.005 : 0.01: ceil(ax(2)*20)/20;

 ax(3)=-160;

 ax(4)=50;

 plot(ax(1:2),[0 0],'-')

 plot([0 0],ax(3:4),'k-')

 plot([0 0]+p.btrk_w_bias,ax(3:4),'r-','linewidth',1.5)

 text(tx2,10,' Bottom')

 if sum(isfinite(bwa_rdi))>0

  [y,x]=hist(bwa_rdi,vh);

  y([1,end])=0;

  ys=sum(y);

  [x,y]=stairs(x,y);

  fill(x,y/max(y)*30-50,'-g')

  plot([0 0]+medianan(bwa_rdi,6),ax(3:4),'-g')

  text(tx2,-40,[' RDI n: ',int2str(ys)])

  text(0.1,-10,[' bias ',num3str(medianan(bva_rdi,6),6,3)],'color','g')

 end

 [y,x]=hist(bwa_own,vh);

 y([1,end])=0;

 ys=sum(y);

 [x,y]=stairs(x,y);

 fill(x,y/max(y)*30-100,'-b')

 plot([0 0]+medianan(bwa_own,6),ax(3:4),'-b')

 text(tx2,-90,[' own n: ',int2str(ys)])

 text(0.1,-60,[' bias ',num3str(medianan(bwa_own,6),6,3)],'color','b')

 [y,x]=hist(di.bvel(3,:)-medianan(di.rw),vh);

 y([1,end])=0;

 ys=sum(y);

 [x,y]=stairs(x,y);

 fill(x,y/max(y)*30-150,'-r')

 text(tx2,-140,['Sup. ens. n: ',int2str(ys)])

 text(0.1,-110,[' bias ',num3str(p.btrk_w_bias,6,3)],'color','r')

 text(-0.3,-154,['W diff: ',num3str(p.btrk_wdiff,6,3),' [m/s]'])

 title([' W bottom track [m/s] '])

 xlabel(' W [m/s]')

 ylabel('depth [m]')

 axis(ax)

subplot(224); hold on;

 plot(rwanbe,izm,'.k');				% all velocities

 plot(rwan,izm,'.g');				% edited velocities

 plot(rwan(iz),izm(iz),'.r');			% used-for-BT velocities

 axis tight

 ax=axis;

 ax(1:2)=[0.5 1.2];

 ax(3)=-60;

 ax(4)=60;

 title([' W bottom track factor '])

 xlabel(' abs(W)/abs(W_{ref}) ')

 ylabel('depth [m]')

 axis(ax)

 plot(ax(1:2),[0 0],'-')

 plot([1 1],ax(3:4),'k-','linewidth',1.5)

 text(tx2,10,' Bottom')

 plot(1-polyval(p.wbslope,[40 0]),[-40 0],'-b')

 plot(1-wbias,-zbias,'pb')

 grid

 text(0.54,-50,[' bias slope ',num3str(p.wbslope(1),6,3),' [1/m]'])

 text(0.54,-58,[' offset  ',num3str(p.wbslope(2),6,3) ])

 text(0.54,50,[' beam angle  ',int2str(d.down.Beam_angle)])

 text(0.54,42,[' bin length  ',int2str(d.down.Cell_length/100),' [m]'])

 text(0.54,34,[' Pings/Ens  ',int2str(d.down.Pings_per_Ensemble)])

 text(0.54,26,[' Frequency  ',int2str(d.down.Frequency),' [kHz]'])

 text(0.54,10,[' Zbottom  ',int2str(p.zbottom),' [m]'])

  streamer([p.name,' Figure 13']);

  orient tall