author | A.M. Thurnherr <athurnherr@yahoo.com> |
Mon, 29 Nov 2010 09:55:54 -0500 | |
changeset 0 | de00d0f32431 |
child 1 | 54222c82435f |
permissions | -rwxr-xr-x |
0
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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#!/usr/bin/perl |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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#====================================================================== |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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# L A D C P P R O C |
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# doc: Thu Sep 16 20:36:10 2010 |
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# dlm: Tue Oct 26 14:29:05 2010 |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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# (c) 2010 A.M. Thurnherr & E. Firing |
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A.M. Thurnherr <athurnherr@yahoo.com>
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# uE-Info: 299 61 NIL 0 0 72 2 2 4 NIL ofnI |
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A.M. Thurnherr <athurnherr@yahoo.com>
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#====================================================================== |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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$antsSummary = 'process LADCP data to get shear, time series'; |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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# NOTES: |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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# - THE CORE OF THIS CODE IS A SIMPLE TRANSCRIPTION OF MERGE.C WRITTEN BY ERIC FIRING |
de00d0f32431
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# - comments starting with ## are taken from Eric's code |
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# - CTD elapsed time is estimated from recno * CTD_sampint |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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# - CTD_elapsed is undefined for records before instrument is in the water |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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# - ITS-90 temp field in degC required |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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# - salin field prequired |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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# - pressure field in dbar required |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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de00d0f32431
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# HISTORY: |
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# Sep 16, 2010: - incepted |
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# Oct 13, 2010: - first working version |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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# Oct 14, 2010: - renamed from LADCPshear |
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# Oct 19, 2010: - added -a)coustic backscatter profiles |
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# Oct 20, 2010: - added -2)dary CTD sensors |
de00d0f32431
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# Oct 23, 2010: - added magnetic-declination correction |
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# Oct 26, 2010: - added tilt calculation |
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($ANTS) = (`which list` =~ m{^(.*)/[^/]*$}); |
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($PERL_TOOLS) = (`which mkProfile` =~ m{^(.*)/[^/]*$}); |
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($LADCPPROC) = ($0 =~ m{^(.*)/[^/]*$}); |
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require "$ANTS/ants.pl"; |
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require "$ANTS/libEOS83.pl"; |
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require "$ANTS/libstats.pl"; |
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require "$LADCPPROC/LADCPproc.bestLag"; |
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require "$LADCPPROC/LADCPproc.BT"; |
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require "$LADCPPROC/LADCPproc.backscatter"; |
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require "$LADCPPROC/LADCPproc.UHcode"; |
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require "$PERL_TOOLS/RDI_BB_Read.pl"; |
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require "$PERL_TOOLS/RDI_Coords.pl"; |
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require "$PERL_TOOLS/RDI_Utils.pl"; |
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|
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$antsParseHeader = 0; |
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&antsUsage('24ab:df:l:n:ops:t:w:',2, |
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'[use -2)dary CTD sensor pair]', |
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'[require -4)-beam LADCP solutions]', |
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'[-s)etup <file>]', |
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'[enable -p)PI editing]', |
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'[-l)ag LADCP <by>] [auto-lag -w)indow <size[60s]>] [-n) <auto-lag windows[20]]', |
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'[-d)iagnostic output]', |
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'output: [-t)ime series <file>] [-f)lag <file>] [-b)ottom-track <file>]', |
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' [-a)coustic backscatter profiles] [b-o)toom-track profs]', |
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'<RDI file> <SeaBird file>'); |
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|
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$RDI_Coords::minValidVels = 4 if ($opt_4); |
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|
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&antsFloatOpt($opt_l); |
de00d0f32431
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&antsCardOpt(\$opt_w,60); |
de00d0f32431
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# old default of -w 30 does not work if there are significant ambiguity-velocity |
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# problems, as is the case, e.g., with 2010_DIMES_US2 station 142 |
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&antsCardOpt(\$opt_n,20); |
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|
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$LADCP_file = &antsFileArg(); |
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$CTD_file = &antsFileArg(); |
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|
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&antsAddParams('LADCP_file',$LADCP_file,'CTD_file',$CTD_file); |
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&antsActivateOut(); |
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|
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#---------------------------------------------------------------------- |
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# Step 1: Read Data |
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#---------------------------------------------------------------------- |
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|
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print(STDERR "Reading LADCP data ($LADCP_file)..."); |
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readData($LADCP_file,\%LADCP); |
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printf(STDERR "\n\t%d ensembles\n",scalar(@{$LADCP{ENSEMBLE}})); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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|
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print(STDERR "Reading CTD data ($CTD_file)..."); |
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open(F,$CTD_file) || croak("$CTD_file: $!\n"); |
de00d0f32431
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while (1) { # parse header |
de00d0f32431
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chomp($hdr = <F>); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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$hdr =~ s/\r*$//; |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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croak("$0: unexpected EOF (format error)\n") unless defined($hdr); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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last if ($hdr eq '*END*'); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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|
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A.M. Thurnherr <athurnherr@yahoo.com>
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$CTD_nfields = $',next if ($hdr =~ /nquan = /); # Layout |
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A.M. Thurnherr <athurnherr@yahoo.com>
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$CTD_nrecs = $',next if ($hdr =~ /nvalues = /); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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$pressF = $1,next if ($hdr =~ /name (\d+) = prDM:/); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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if ($opt_2) { |
de00d0f32431
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$tempF = $1,next if ($hdr =~ /name (\d+) = t190C:/); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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$salinF = $1,next if ($hdr =~ /name (\d+) = sal11:/); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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} else { |
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$tempF = $1,next if ($hdr =~ /name (\d+) = t090C:/); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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$salinF = $1,next if ($hdr =~ /name (\d+) = sal00:/); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
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} |
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A.M. Thurnherr <athurnherr@yahoo.com>
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|
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&antsAddParams('start_time',$1),next # selected metadata |
de00d0f32431
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99 |
if ($hdr =~ /start_time = (.*)/); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
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|
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&antsAddParams('station',$1),next |
de00d0f32431
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if ($hdr =~ /Station\s*:\s*(.*)/); |
de00d0f32431
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&antsAddParams('ship',$1),next |
de00d0f32431
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104 |
if ($hdr =~ /Ship\s*:\s*(.*)\s*$/); |
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&antsAddParams('cruise',$1),next |
de00d0f32431
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if ($hdr =~ /Cruise\s*:\s*(.*)\s*$/); |
de00d0f32431
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107 |
&antsAddParams('time',$1),next |
de00d0f32431
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108 |
if ($hdr =~ /Time\s*:\s*(.*)/); |
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109 |
&antsAddParams('date',$1),next |
de00d0f32431
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110 |
if ($hdr =~ /Date\s*:\s*(.*)/); |
de00d0f32431
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111 |
|
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112 |
if ($hdr =~ /Latitude\s*[=:]\s*/) { |
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|
113 |
($deg,$min,$NS) = split(/ /,$'); |
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parents:
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|
114 |
$lat = $deg + $min/60; |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
115 |
$lat *= -1 if ($NS eq 'S'); |
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A.M. Thurnherr <athurnherr@yahoo.com>
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|
116 |
&antsAddParams('lat',$lat); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
117 |
next; |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
118 |
} |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
119 |
if ($hdr =~ /Longitude\s*[=:]\s*/) { |
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|
120 |
($deg,$min,$EW) = split(/ /,$'); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
121 |
$lon = $deg + $min/60; |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
122 |
$lon *= -1 if ($EW eq 'W'); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
123 |
&antsAddParams('lon',$lon); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
124 |
next; |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
125 |
} |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
126 |
|
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parents:
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|
127 |
if ($hdr =~ /interval = seconds: /) { |
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A.M. Thurnherr <athurnherr@yahoo.com>
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|
128 |
$CTD_sampint = 1*$'; |
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|
129 |
&antsAddParams('CTD_interval',1/$CTD_sampint); |
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parents:
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|
130 |
next; |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
131 |
} |
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parents:
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|
132 |
|
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
133 |
$CTD_badval = $',next |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
134 |
if ($hdr =~ /bad_flag = /); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
135 |
$CTD_file_type = $',next |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
136 |
if ($hdr =~ /file_type = /); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
137 |
} |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
138 |
|
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
139 |
croak("$CTD_file: cannot determine CTD file layout\n") |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
140 |
unless ($CTD_nfields && $CTD_nrecs); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
141 |
croak("$CTD_file: cannot determine missing value\n") |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
142 |
unless defined($CTD_badval); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
143 |
croak("$CTD_file: not a CTD time series file\n") |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
144 |
unless ($CTD_sampint); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
145 |
croak("$CTD_file: no pressure field\n") |
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initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
146 |
unless defined($pressF); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
147 |
croak("$CTD_file: no suitable temperature field\n") |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
148 |
unless defined($tempF); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
149 |
croak("$CTD_file: no suitable salinity field\n") |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
150 |
unless defined($salinF); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
151 |
|
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
152 |
croak("$0: unknown latitude\n") unless defined($lat); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
153 |
croak("$0: unknown longitude\n") unless defined($lon); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
154 |
|
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
155 |
&antsAddParams('ITS',$P{ITS} = 90); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
156 |
|
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
157 |
if ($CTD_file_type eq 'ascii') { |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
158 |
while (1) { |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
159 |
last unless (@rec = &antsFileIn(F)); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
160 |
push(@CTD_press,($rec[$pressF] == $CTD_badval) ? nan : $rec[$pressF]); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
161 |
push(@CTD_temp, ($rec[$tempF] == $CTD_badval) ? nan : $rec[$tempF]); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
162 |
push(@CTD_salin,($rec[$salinF] == $CTD_badval) ? nan : $rec[$salinF]); |
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initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
163 |
} |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
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|
164 |
} elsif ($CTD_file_type eq 'binary') { |
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initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
165 |
|
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
166 |
my($fbits) = 8 * length(pack('f',0)); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
167 |
croak(sprintf("$0: incompatible native CPU float representation (%d instead of 32bits)\n",fbits)) |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
168 |
unless ($fbits == 32); |
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initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
169 |
|
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
170 |
croak("$CTD_file: can't read binary data\n") |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
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|
171 |
unless (read(F,$dta,4*$CTD_nfields*$CTD_nrecs) == 4*$CTD_nfields*$CTD_nrecs); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
172 |
print(STDERR "$CTD_file: WARNING: extraneous data at EOF\n") unless eof(F); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
173 |
|
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
174 |
$dta = pack('V*',unpack('N*',$dta)) # big-endian CPU |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
175 |
if (unpack('h*', pack('s', 1)) =~ /01/); # c.f. perlport(1) |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
176 |
|
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
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|
177 |
@dta = unpack("f*",$dta); |
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initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
178 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
179 |
for ($r=0; $r<$CTD_nrecs; $r++) { |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
180 |
push(@CTD_press,($dta[$r*$CTD_nfields+$pressF] == $CTD_badval) ? nan : $dta[$r*$CTD_nfields+$pressF]); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
181 |
push(@CTD_temp, ($dta[$r*$CTD_nfields+$tempF] == $CTD_badval) ? nan : $dta[$r*$CTD_nfields+$tempF]); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
182 |
push(@CTD_salin,($dta[$r*$CTD_nfields+$salinF] == $CTD_badval) ? nan : $dta[$r*$CTD_nfields+$salinF]); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
183 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
184 |
} else { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
185 |
croak("$CTD_file: unknown CTD file type $CTD_file_type\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
186 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
187 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
188 |
printf(STDERR "\n\t%d scans\n",scalar(@CTD_press)); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
189 |
|
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
190 |
#---------------------------------------------------------------------- |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
191 |
# Step 2: Set Processing Parameters |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
192 |
#---------------------------------------------------------------------- |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
193 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
194 |
print(STDERR "Setting processing parameters...\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
195 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
196 |
printf(STDERR "\tloading $LADCPPROC/LADCPproc.defaults...\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
197 |
require "$LADCPPROC/LADCPproc.defaults"; |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
198 |
|
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
199 |
if (defined($opt_s)) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
200 |
print(STDERR "\tloading $opt_s...\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
201 |
require $opt_s; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
202 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
203 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
204 |
if ($LADCP{BLANKING_DISTANCE} == 0) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
205 |
print(STDERR "\t\tBLANKING_DISTANCE == 0 => excluding all data from bin 1\n") |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
206 |
if ($opt_d); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
207 |
$wbin_start = 2 unless ($wbin_start > 2); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
208 |
$ubin_start = 2 unless ($ubin_start > 2); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
209 |
$shbin_start = 2 unless ($shbin_start > 2); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
210 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
211 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
212 |
&antsAddParams('ADCP_orientation', |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
213 |
$dta->{ENSEMBLE}[0]->{XDUCER_FACING_UP} ? 'uplooker' : 'downlooker'); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
214 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
215 |
$SHEAR_PREGRID_DZ = 20; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
216 |
$GRID_DZ = 5; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
217 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
218 |
my($year) = substr($LADCP{ENSEMBLE}[0]->{DATE},6,4); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
219 |
my($month) = substr($LADCP{ENSEMBLE}[0]->{DATE},0,2); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
220 |
my($dau ) = substr($LADCP{ENSEMBLE}[0]->{DATE},3,2); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
221 |
my($magdec,$maginc,$h_strength,$v_strength) = split('\s+',`magdec $lon $lat $year $month $day`); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
222 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
223 |
croak("$0: unknown magnetic declination\n") |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
224 |
unless defined($magdec); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
225 |
|
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226 |
&antsAddParams('magnetic_declination',$magdec); |
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227 |
|
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228 |
#---------------------------------------------------------------------- |
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229 |
# Step 3: Pre-Process CTD & LADCP Data |
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230 |
#---------------------------------------------------------------------- |
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231 |
|
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232 |
printf(STDERR "Pre-processing data..."); |
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233 |
printf(STDERR "\n\tCTD..."); |
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234 |
|
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235 |
#------------------------ |
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236 |
# clean CTD pressure data |
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237 |
#------------------------ |
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238 |
my($pSpikes) = 0; |
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239 |
for (my($r)=1; $r<$CTD_nrecs; $r++) { |
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240 |
$pSpikes++,$CTD_press[$r]=nan |
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241 |
if (abs($CTD_press[$r]-$CTD_press[$r-1])/$CTD_sampint > 2); |
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242 |
} |
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243 |
print(STDERR "\n\t\t$pSpikes pressure spikes removed") |
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244 |
if ($pSpikes>0 && $opt_d); |
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245 |
|
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246 |
#------------------------------------ |
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247 |
# calculate w and find deepest record |
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248 |
#------------------------------------ |
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249 |
$CTD_maxpress = -9e99; |
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250 |
for (my($r)=1; $r<$CTD_nrecs-1; $r++) { |
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251 |
$CTD_w[$r] = 0.99*($CTD_press[$r+1] - $CTD_press[$r-1]) / (2*$CTD_sampint); |
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252 |
if ($CTD_press[$r] > $CTD_maxpress) { |
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253 |
$CTD_maxpress = $CTD_press[$r]; |
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254 |
$CTD_bottom = $r; |
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255 |
} |
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256 |
} |
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257 |
print(STDERR "\n"); |
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258 |
|
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259 |
#---------------------------------------------------------------------- |
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260 |
# Step 2b: Pre-Process LADCP Data |
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261 |
#---------------------------------------------------------------------- |
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262 |
|
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263 |
print(STDERR "\tLADCP..."); |
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|
264 |
|
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265 |
#------------------------------------------- |
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266 |
# transform to earth coordinates if required |
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267 |
#------------------------------------------- |
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268 |
|
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269 |
$U = 0; # velocity indices |
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270 |
$V = 1; |
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271 |
$W = 2; |
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272 |
$E = 3; |
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|
273 |
|
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274 |
$LADCP{HEADING_BIAS} = -$magdec; |
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275 |
|
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276 |
if ($LADCP{BEAM_COORDINATES}) { |
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277 |
print(STDERR "\n\t\ttransforming beam to Earth coordinates...") |
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|
278 |
if ($opt_d); |
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279 |
for (my($ens)=0; $ens<=$#{$LADCP{ENSEMBLE}}; $ens++) { |
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280 |
$LADCP{ENSEMBLE}[$ens]->{TILT} = &angle_from_vertical($LADCP{ENSEMBLE}[$ens]->{PITCH},$LADCP{ENSEMBLE}[$ens]->{ROLL}); |
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281 |
for (my($bin)=0; $bin<$LADCP{N_BINS}; $bin++) { |
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282 |
@{$LADCP{ENSEMBLE}[$ens]->{VELOCITY}[$bin]} = |
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|
283 |
velInstrumentToEarth(\%LADCP,$ens,velBeamToInstrument(\%LADCP,@{$LADCP{ENSEMBLE}[$ens]->{VELOCITY}[$bin]})); |
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|
284 |
@{$LADCP{ENSEMBLE}[$ens]->{PERCENT_GOOD}[$bin]} = # fake it to fool ref_lr_w |
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285 |
(0,0,0,defined($LADCP{ENSEMBLE}[$ens]->{VELOCITY}[$bin][$W]) ? 100 : 0); |
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|
286 |
} |
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|
287 |
} |
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|
288 |
$LADCP{BEAM_COORDINATES} = 0; |
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|
289 |
$LADCP{EARTH_COORDINATES} = 1; |
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|
290 |
unless ($opt_4) { |
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|
291 |
print(STDERR "\n\t\t\t3-beam solutions: $RDI_Coords::threeBeam_1 $RDI_Coords::threeBeam_2 $RDI_Coords::threeBeam_3 $RDI_Coords::threeBeam_4") |
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|
292 |
if ($opt_d); |
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|
293 |
&antsAddParams('3_beam_solutions',"$RDI_Coords::threeBeam_1 $RDI_Coords::threeBeam_2 $RDI_Coords::threeBeam_3 $RDI_Coords::threeBeam_4"); |
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|
294 |
} |
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|
295 |
} elsif ($LADCP{EARTH_COORDINATES}) { |
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|
296 |
printf(STDERR "\n\t\tcorrecting for magnetic declination of %.1f deg...",$magdec) |
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|
297 |
if ($opt_d); |
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|
298 |
for (my($ens)=0; $ens<=$#{$LADCP{ENSEMBLE}}; $ens++) { |
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|
299 |
$LADCP{ENSEMBLE}[$ens]->{TILT} = &angle_from_vertical($LADCP{ENSEMBLE}[$ens]->{PITCH},$LADCP{ENSEMBLE}[$ens]->{ROLL}); |
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|
300 |
for (my($bin)=0; $bin<$LADCP{N_BINS}; $bin++) { |
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A.M. Thurnherr <athurnherr@yahoo.com>
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|
301 |
@{$LADCP{ENSEMBLE}[$ens]->{VELOCITY}[$bin]} = |
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initial version to process P403 yoyo
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|
302 |
velApplyHdgBias(\%LADCP,$ens,@{$LADCP{ENSEMBLE}[$ens]->{VELOCITY}[$bin]}); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
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|
303 |
} |
de00d0f32431
initial version to process P403 yoyo
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parents:
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|
304 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
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|
305 |
} else { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
306 |
croak("$0: can only handle beam or earth coordinates\n") |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
307 |
} |
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parents:
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changeset
|
308 |
|
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
309 |
print(STDERR "\n"); |
de00d0f32431
initial version to process P403 yoyo
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parents:
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changeset
|
310 |
|
de00d0f32431
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parents:
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|
311 |
#------------------------------------------------------ |
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parents:
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|
312 |
# construct a depth-vs-time "profile" from the raw data |
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parents:
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|
313 |
#------------------------------------------------------ |
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parents:
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|
314 |
|
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
315 |
print(STDERR "\t\tconstructing profile time series...") |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
316 |
if ($opt_d); |
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
317 |
|
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
318 |
($LADCP_start,$LADCP_end,$LADCP_bottom,$w_gap_time,$zErr,$maxz) = |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
319 |
mk_prof(\%LADCP,0,undef,1,6,70,0.1,9999); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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|
320 |
croak("\n$LADCP_file: no good ensembles found\n") |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
321 |
unless defined($LADCP_start); |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
322 |
|
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
323 |
if ($opt_d) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
324 |
printf(STDERR "\n\t\t\tStart of cast : %s (#%5d) at %6.1fm\n", |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
325 |
$LADCP{ENSEMBLE}[$LADCP_start]->{TIME}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
326 |
$LADCP{ENSEMBLE}[$LADCP_start]->{NUMBER}, |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
327 |
$LADCP{ENSEMBLE}[$LADCP_start]->{DEPTH}); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
328 |
printf(STDERR "\t\t\tBottom of cast : %s (#%5d) at %6.1fm\n", |
de00d0f32431
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A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
329 |
$LADCP{ENSEMBLE}[$LADCP_bottom]->{TIME}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
330 |
$LADCP{ENSEMBLE}[$LADCP_bottom]->{NUMBER}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
331 |
$LADCP{ENSEMBLE}[$LADCP_bottom]->{DEPTH}); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
332 |
printf(STDERR "\t\t\tEnd of cast : %s (#%5d) at %6.1fm", |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
333 |
$LADCP{ENSEMBLE}[$LADCP_end]->{TIME}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
334 |
$LADCP{ENSEMBLE}[$LADCP_end]->{NUMBER}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
335 |
$LADCP{ENSEMBLE}[$LADCP_end]->{DEPTH}); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
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changeset
|
336 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
337 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
338 |
print(STDERR "\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
339 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
340 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
341 |
# Step 4: Add CTD to LADCP Data & correct velocities for sound speed |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
342 |
# - {DEPTH} field is overwritten! |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
343 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
344 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
345 |
print(STDERR "Matching CTD to LADCP time series..."); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
346 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
347 |
$opt_l = &lagLADCP2CTD() |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
348 |
unless defined($opt_l); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
349 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
350 |
print(STDERR "Associating CTD data with LADCP ensembles..."); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
351 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
352 |
for (my($ens)=$LADCP_start; $ens<=$LADCP_end; $ens++) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
353 |
my($r) = int(($LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME} - $opt_l) / $CTD_sampint); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
354 |
if ($r < 0 && $ens == $LADCP_start) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
355 |
$r = int(($LADCP{ENSEMBLE}[++$ens]->{ELAPSED_TIME} - $opt_l) / $CTD_sampint) |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
356 |
while ($r < 0); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
357 |
printf(STDERR "\n\tCTD data begin with instrument already in water => skipping %ds of LADCP data", |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
358 |
$LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$LADCP_start]->{ELAPSED_TIME}); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
359 |
$LADCP_start = $ens; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
360 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
361 |
if ($r > $#CTD_press) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
362 |
printf(STDERR "\n\tCTD data end while instrument is still in water => truncating %ds of LADCP data", |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
363 |
$LADCP{ENSEMBLE}[$LADCP_end]->{ELAPSED_TIME}-$LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME}); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
364 |
$LADCP_end = $ens - 1; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
365 |
last; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
366 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
367 |
my($dr); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
368 |
for ($dr=0; !numberp($CTD_press[$r+$dr]); $dr--) {} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
369 |
$LADCP{ENSEMBLE}[$ens]->{DEPTH} = depth($CTD_press[$r+$dr],$lat); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
370 |
$LADCP{ENSEMBLE}[$ens]->{CTD_W} = $CTD_w[$r]; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
371 |
$LADCP{ENSEMBLE}[$ens]->{CTD_TEMP} = $CTD_temp[$r]; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
372 |
$LADCP{ENSEMBLE}[$ens]->{CTD_SVEL} = sVel($CTD_salin[$r],$CTD_temp[$r],$CTD_press[$r+$dr]); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
373 |
my($sscorr) = $LADCP{ENSEMBLE}[$ens]->{CTD_SVEL} / $LADCP{ENSEMBLE}[$ens]->{SPEED_OF_SOUND}; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
374 |
for (my($bin)=0; $bin<$LADCP{N_BINS}; $bin++) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
375 |
next unless defined($LADCP{ENSEMBLE}[$ens]->{VELOCITY}[$bin][$W]); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
376 |
$LADCP{ENSEMBLE}[$ens]->{VELOCITY}[$bin][$U] *= $sscorr; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
377 |
$LADCP{ENSEMBLE}[$ens]->{VELOCITY}[$bin][$V] *= $sscorr; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
378 |
$LADCP{ENSEMBLE}[$ens]->{VELOCITY}[$bin][$W] *= $sscorr; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
379 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
380 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
381 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
382 |
&antsAddParams('bottom_depth',round($LADCP{ENSEMBLE}[$LADCP_bottom]->{DEPTH}), |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
383 |
'start_date',$LADCP{ENSEMBLE}[$LADCP_start]->{DATE}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
384 |
'start_time',$LADCP{ENSEMBLE}[$LADCP_start]->{TIME}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
385 |
'bottom_date',$LADCP{ENSEMBLE}[$LADCP_bottom]->{DATE}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
386 |
'bottom_time',$LADCP{ENSEMBLE}[$LADCP_bottom]->{TIME}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
387 |
'end_date',$LADCP{ENSEMBLE}[$LADCP_end]->{DATE}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
388 |
'end_time',$LADCP{ENSEMBLE}[$LADCP_end]->{TIME}); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
389 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
390 |
print(STDERR "\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
391 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
392 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
393 |
# Step : Calculate Acoustic Backscatter Profile |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
394 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
395 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
396 |
print(STDERR "Finding seabed in acoustic backscatter profiles..."); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
397 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
398 |
mk_backscatter_profs($LADCP_start,$LADCP_end); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
399 |
($water_depth,$sig_water_depth) = |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
400 |
find_backscatter_seabed($LADCP{ENSEMBLE}[$LADCP_bottom]->{DEPTH}); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
401 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
402 |
$min_hab = $water_depth - $LADCP{ENSEMBLE}[$LADCP_bottom]->{DEPTH}; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
403 |
printf(STDERR "\n\twater depth = %d(+-%.1f)m",$water_depth,$sig_water_depth); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
404 |
printf(STDERR "\n\tclosest approach = %dmab",$min_hab); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
405 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
406 |
print(STDERR "\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
407 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
408 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
409 |
# Step 5: Find Seabed |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
410 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
411 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
412 |
print(STDERR "Finding seabed in BT data..."); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
413 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
414 |
($BT_water_depth,$sig_BT_water_depth) = |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
415 |
find_seabed(\%LADCP,$LADCP_bottom,$LADCP{BEAM_COORDINATES}); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
416 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
417 |
if (defined($BT_water_depth)) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
418 |
$min_hab = $BT_water_depth - $LADCP{ENSEMBLE}[$LADCP_bottom]->{DEPTH}; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
419 |
printf(STDERR "\n\twater depth = %d(+-%.1f)m",$BT_water_depth,$sig_BT_water_depth); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
420 |
printf(STDERR "\n\tclosest approach = %dmab",$min_hab); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
421 |
# $water_depth = $BT_water_depth; # assume BT data are better |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
422 |
# $sig_water_depth = $sig_BT_water_depth; # (at least they are higher vertical resolution) |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
423 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
424 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
425 |
unless (defined($water_depth)) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
426 |
print(STDERR "\n\tno seabed found\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
427 |
print(STDERR "\n\tunknown water depth => PPI editing disabled\n") |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
428 |
if ($opt_d); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
429 |
$clip_margin = 0; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
430 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
431 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
432 |
print(STDERR "\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
433 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
434 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
435 |
# Step 6: Edit Data |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
436 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
437 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
438 |
print(STDERR "Calculating shear profiles...\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
439 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
440 |
$LADCP_start = 1 if ($LADCP_start == 0); # ensure that there is previous ensemble |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
441 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
442 |
print(STDERR "\tdowncast..."); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
443 |
edit_velocity($LADCP_start,$LADCP_bottom); # downcast |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
444 |
calc_shear($LADCP_start,$LADCP_bottom,$SHEAR_PREGRID_DZ,0); # pre-grid shear @SHEAR_PREGRID_DZm resolution |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
445 |
calc_shear($LADCP_start,$LADCP_bottom,$GRID_DZ,1); # calculate final gridded shear profile |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
446 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
447 |
@dc_sh_n = @sh_n; # save downcast results |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
448 |
@dc_ush_mu = @ush_mu; @dc_ush_sig = @ush_sig; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
449 |
@dc_vsh_mu = @vsh_mu; @dc_vsh_sig = @vsh_sig; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
450 |
@dc_wsh_mu = @wsh_mu; @dc_wsh_sig = @wsh_sig; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
451 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
452 |
print(STDERR "\n\tupcast..."); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
453 |
edit_velocity($LADCP_end,$LADCP_bottom); # upcast |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
454 |
calc_shear($LADCP_end,$LADCP_bottom,$SHEAR_PREGRID_DZ,0); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
455 |
calc_shear($LADCP_end,$LADCP_bottom,$GRID_DZ,1); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
456 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
457 |
print(STDERR "\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
458 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
459 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
460 |
# Step 7: Get bottom track profile |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
461 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
462 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
463 |
print(STDERR "Getting BT profile..."); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
464 |
getBTprof($LADCP_start,$LADCP_end); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
465 |
print(STDERR "\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
466 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
467 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
468 |
# Step 8: Write Output |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
469 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
470 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
471 |
print(STDERR "Writing shear profiles..."); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
472 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
473 |
@antsNewLayout = ('depth','dc_nshear','dc_u_z','dc_u_z.sig','dc_v_z','dc_v_z.sig','dc_w_z','dc_w_z.sig', |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
474 |
'uc_nshear','uc_u_z','uc_u_z.sig','uc_v_z','uc_v_z.sig','uc_w_z','uc_w_z.sig'); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
475 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
476 |
$commonParams = $antsCurParams; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
477 |
&antsAddParams('ubin_start',$ubin_start,'ubin_end',$ubin_end, # record processing params |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
478 |
'wbin_start',$wbin_start,'wbin_end',$wbin_end, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
479 |
'shbin_start',$shbin_start,'shbin_end',$shbin_end, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
480 |
'w_ref_bin',$w_ref_bin,'w_dif',$w_dif, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
481 |
'wake_hd_dif',$wake_hd_dif,'wake_ang_min',$wake_ang_min, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
482 |
'min_wake_w',$min_wake_w,'n_wake_bins',$n_wake_bins, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
483 |
'e_max',$e_max,'min_cor',$min_cor, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
484 |
'max_shdev',$max_shdev,'max_shdev_sum',$max_shdev_sum, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
485 |
'water_depth',round($water_depth),'water_depth.sig',round($sig_water_depth), |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
486 |
'min_hab',round($min_hab), |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
487 |
'clip_margin',$clip_margin,'first_clip_bin',$first_clip_bin); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
488 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
489 |
for (my($gi)=0; $gi<@ush_mu; $gi++) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
490 |
&antsOut(depthOfGI($gi), # depth in center of bin |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
491 |
$dc_sh_n[$gi], # downcast |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
492 |
$dc_ush_mu[$gi],$dc_ush_sig[$gi], |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
493 |
$dc_vsh_mu[$gi],$dc_vsh_sig[$gi], |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
494 |
$dc_wsh_mu[$gi],$dc_wsh_sig[$gi], |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
495 |
$sh_n[$gi], # upcast |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
496 |
$ush_mu[$gi],$ush_sig[$gi], |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
497 |
$vsh_mu[$gi],$vsh_sig[$gi], |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
498 |
$wsh_mu[$gi],$wsh_sig[$gi]); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
499 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
500 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
501 |
print(STDERR "\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
502 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
503 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
504 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
505 |
if (defined($opt_a)) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
506 |
print(STDERR "Writing acoustic backscatter profiles..."); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
507 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
508 |
for (my($bin)=0; $bin<$LADCP{N_BINS}; $bin++) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
509 |
my($fn) = sprintf("bin%02d.Sv",$bin); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
510 |
print(STDERR " $fn"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
511 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
512 |
@antsNewLayout = ('depth','Sv'); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
513 |
&antsOut('EOF'); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
514 |
$antsCurParams = $commonParams; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
515 |
close(STDOUT); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
516 |
open(STDOUT,">$fn") || croak("$fn: $!\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
517 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
518 |
for (my($gi)=0; $gi<@sSv; $gi++) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
519 |
&antsOut(depthOfGI($gi), |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
520 |
$nSv[$gi][$bin] ? $sSv[$gi][$bin]/ $nSv[$gi][$bin] : nan); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
521 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
522 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
523 |
print(STDERR "\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
524 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
525 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
526 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
527 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
528 |
if (defined($opt_t)) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
529 |
print(STDERR "Writing time series to $opt_t..."); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
530 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
531 |
@antsNewLayout = ('ens','elapsed','depth','CTD_w','LADCP_w'); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
532 |
&antsOut('EOF'); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
533 |
$antsCurParams = $commonParams; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
534 |
close(STDOUT); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
535 |
open(STDOUT,">$opt_t") || croak("$opt_t: $!\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
536 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
537 |
for (my($ens)=$LADCP_start; $ens<=$LADCP_end; $ens++) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
538 |
&antsOut($LADCP{ENSEMBLE}[$ens]->{NUMBER}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
539 |
$LADCP{ENSEMBLE}[$ens]->{ELAPSED_TIME}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
540 |
$LADCP{ENSEMBLE}[$ens]->{DEPTH}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
541 |
$LADCP{ENSEMBLE}[$ens]->{CTD_W}, |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
542 |
$LADCP{ENSEMBLE}[$ens]->{W}); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
543 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
544 |
print(STDERR "\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
545 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
546 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
547 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
548 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
549 |
if (defined($opt_b)) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
550 |
print(STDERR "Writing bottom-track data to $opt_b..."); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
551 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
552 |
@antsNewLayout = ('depth','u','v','w','u.sig','v.sig','w.sig','ndata'); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
553 |
&antsOut('EOF'); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
554 |
$antsCurParams = $commonParams; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
555 |
close(STDOUT); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
556 |
open(STDOUT,">$opt_b") || croak("$opt_b: $!\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
557 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
558 |
my($skipped); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
559 |
for (my($gi)=0; $gi<@BT_nsamp; $gi++) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
560 |
$skipped = 1 if ($BT_nsamp[$gi] > 0); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
561 |
next unless ($skipped); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
562 |
&antsOut(depthOfGI($gi),$BTu[$gi],$BTv[$gi],$BTw[$gi],$BTu_sig[$gi],$BTv_sig[$gi],$BTw_sig[$gi],$BT_nsamp[$gi]); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
563 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
564 |
print(STDERR "\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
565 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
566 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
567 |
#---------------------------------------------------------------------- |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
568 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
569 |
if (defined($opt_f)) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
570 |
print(STDERR "Writing data flags to $opt_f..."); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
571 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
572 |
@antsNewLayout = ('ens'); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
573 |
for (my($i)=1; $i<=$LADCP{N_BINS}; $i++) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
574 |
$antsNewLayout[$i] = "bin$i"; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
575 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
576 |
&antsOut('EOF'); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
577 |
$antsCurParams = $commonParams; |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
578 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
579 |
close(STDOUT); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
580 |
open(STDOUT,">$opt_f") || croak("$opt_f: $!\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
581 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
582 |
&antsPrintHeaders(STDOUT,@antsNewLayout); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
583 |
for (my($ens)=$LADCP_start; $ens<=$LADCP_end; $ens++) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
584 |
printf('%4d ',$LADCP{ENSEMBLE}[$ens]->{NUMBER}); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
585 |
for (my($bin)=0; $bin<$LADCP{N_BINS}; $bin++) { |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
586 |
printf("%02x ",$edit_flags[$ens][$bin]); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
587 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
588 |
print($opt_R); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
589 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
590 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
591 |
print(STDERR "\n"); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
592 |
} |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
593 |
|
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
594 |
&antsExit(); |
de00d0f32431
initial version to process P403 yoyo
A.M. Thurnherr <athurnherr@yahoo.com>
parents:
diff
changeset
|
595 |